Cluster: HRGMv2_3169_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3169
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3169_40 | HRGMv2_3169_40_6 | 6624 | 7955 | + | 3.A.1.1.45 |
| TC | HRGMv2_3169_40 | HRGMv2_3169_40_7 | 8163 | 9014 | + | 3.A.1.1.45 |
| TC | HRGMv2_3169_40 | HRGMv2_3169_40_8 | 9014 | 9856 | + | 3.A.1.1.45 |
| CAZyme | HRGMv2_3169_40 | HRGMv2_3169_40_9 | 9887 | 11470 | + | GH77 |
Gene ID: HRGMv2_3169_40_6
Type: TC
Location: 6624 - 7955 (+)
Type: TC
Location: 6624 - 7955 (+)
Gene ID: HRGMv2_3169_40_7
Type: TC
Location: 8163 - 9014 (+)
Type: TC
Location: 8163 - 9014 (+)
Gene ID: HRGMv2_3169_40_8
Type: TC
Location: 9014 - 9856 (+)
Type: TC
Location: 9014 - 9856 (+)
Gene ID: HRGMv2_3169_40_9
Type: CAZyme
Location: 9887 - 11470 (+)
Type: CAZyme
Location: 9887 - 11470 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp944385175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.