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Cluster: HRGMv2_3169_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3169_15 HRGMv2_3169_15_38 32536 35115 + 3.A.9.1.2
pfam HRGMv2_3169_15 HRGMv2_3169_15_39 35232 35984 + HGSNAT_cat
TF HRGMv2_3169_15 HRGMv2_3169_15_40 36000 36236 + HTH_3
CAZyme HRGMv2_3169_15 HRGMv2_3169_15_41 36299 38464 - GH112
pfam HRGMv2_3169_15 HRGMv2_3169_15_42 38489 38680 - DUF6903
TC HRGMv2_3169_15 HRGMv2_3169_15_43 38690 39571 - 3.A.1.1.25
TC HRGMv2_3169_15 HRGMv2_3169_15_44 39587 40471 - 3.A.1.1.45
Gene ID: HRGMv2_3169_15_38
Type: TC
Location: 32536 - 35115 (+)
Gene ID: HRGMv2_3169_15_39
Type: pfam
Location: 35232 - 35984 (+)
Gene ID: HRGMv2_3169_15_40
Type: TF
Location: 36000 - 36236 (+)
Gene ID: HRGMv2_3169_15_41
Type: CAZyme
Location: 36299 - 38464 (-)
Gene ID: HRGMv2_3169_15_42
Type: pfam
Location: 38489 - 38680 (-)
Gene ID: HRGMv2_3169_15_43
Type: TC
Location: 38690 - 39571 (-)
Gene ID: HRGMv2_3169_15_44
Type: TC
Location: 39587 - 40471 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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