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Cluster: HRGMv2_3169_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3169_8 HRGMv2_3169_8_16 16131 17540 - 2.A.118.1.4
STP HRGMv2_3169_8 HRGMv2_3169_8_17 17788 18258 + NUDIX
TC HRGMv2_3169_8 HRGMv2_3169_8_18 18255 19358 + 2.A.45.2.6
pfam HRGMv2_3169_8 HRGMv2_3169_8_19 19425 20429 - ETF_alpha | ETF
pfam HRGMv2_3169_8 HRGMv2_3169_8_20 20443 21243 - ETF
CAZyme HRGMv2_3169_8 HRGMv2_3169_8_21 21245 22690 - AA4
Gene ID: HRGMv2_3169_8_16
Type: TC
Location: 16131 - 17540 (-)
Gene ID: HRGMv2_3169_8_17
Type: STP
Location: 17788 - 18258 (+)
Gene ID: HRGMv2_3169_8_18
Type: TC
Location: 18255 - 19358 (+)
Gene ID: HRGMv2_3169_8_19
Type: pfam
Location: 19425 - 20429 (-)
Gene ID: HRGMv2_3169_8_20
Type: pfam
Location: 20443 - 21243 (-)
Gene ID: HRGMv2_3169_8_21
Type: CAZyme
Location: 21245 - 22690 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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