Cluster: HRGMv2_3160_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3160
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3160_46 | HRGMv2_3160_46_9 | 7398 | 7937 | - | 9.B.156.3.1 |
| TC | HRGMv2_3160_46 | HRGMv2_3160_46_10 | 7939 | 8520 | - | 9.B.156.3.1 |
| TF | HRGMv2_3160_46 | HRGMv2_3160_46_11 | 8671 | 8910 | + | SpoVT_AbrB |
| CAZyme | HRGMv2_3160_46 | HRGMv2_3160_46_12 | 9041 | 9931 | - | GH25 |
Gene ID: HRGMv2_3160_46_9
Type: TC
Location: 7398 - 7937 (-)
Type: TC
Location: 7398 - 7937 (-)
Gene ID: HRGMv2_3160_46_10
Type: TC
Location: 7939 - 8520 (-)
Type: TC
Location: 7939 - 8520 (-)
Gene ID: HRGMv2_3160_46_11
Type: TF
Location: 8671 - 8910 (+)
Type: TF
Location: 8671 - 8910 (+)
Gene ID: HRGMv2_3160_46_12
Type: CAZyme
Location: 9041 - 9931 (-)
Type: CAZyme
Location: 9041 - 9931 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS1601
Species
UMGS1601 sp900545345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.