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Cluster: HRGMv2_3160_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3160_37 HRGMv2_3160_37_2 2142 3020 - 2.A.115.1.1
pfam HRGMv2_3160_37 HRGMv2_3160_37_3 3035 4150 - UPF0020 | THUMP | RlmL_1st
CAZyme HRGMv2_3160_37 HRGMv2_3160_37_4 4211 6442 - GT51
CAZyme HRGMv2_3160_37 HRGMv2_3160_37_5 6559 7590 - GH5_2
pfam HRGMv2_3160_37 HRGMv2_3160_37_6 7845 9089 - AdoHcyase_NAD | 2-Hacid_dh_C | AdoHcyase | AdoHcyase | KARI_N
pfam HRGMv2_3160_37 HRGMv2_3160_37_7 9157 9591 - 4HBT | 4HBT_2
CAZyme HRGMv2_3160_37 HRGMv2_3160_37_8 9713 11104 - GH5_4
pfam HRGMv2_3160_37 HRGMv2_3160_37_9 11298 11975 - QueH
pfam HRGMv2_3160_37 HRGMv2_3160_37_10 12149 12415 + SpoIIID
CAZyme HRGMv2_3160_37 HRGMv2_3160_37_11 12715 15207 + GT35
Gene ID: HRGMv2_3160_37_2
Type: TC
Location: 2142 - 3020 (-)
Gene ID: HRGMv2_3160_37_3
Type: pfam
Location: 3035 - 4150 (-)
Gene ID: HRGMv2_3160_37_4
Type: CAZyme
Location: 4211 - 6442 (-)
Gene ID: HRGMv2_3160_37_5
Type: CAZyme
Location: 6559 - 7590 (-)
Gene ID: HRGMv2_3160_37_6
Type: pfam
Location: 7845 - 9089 (-)
Gene ID: HRGMv2_3160_37_7
Type: pfam
Location: 9157 - 9591 (-)
Gene ID: HRGMv2_3160_37_8
Type: CAZyme
Location: 9713 - 11104 (-)
Gene ID: HRGMv2_3160_37_9
Type: pfam
Location: 11298 - 11975 (-)
Gene ID: HRGMv2_3160_37_10
Type: pfam
Location: 12149 - 12415 (+)
Gene ID: HRGMv2_3160_37_11
Type: CAZyme
Location: 12715 - 15207 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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