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Cluster: HRGMv2_3134_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3134_3 HRGMv2_3134_3_7 4498 6069 - GH35
CAZyme HRGMv2_3134_3 HRGMv2_3134_3_8 6117 8168 - GH42
TC HRGMv2_3134_3 HRGMv2_3134_3_9 8464 9417 + 3.A.1.1.29
TC HRGMv2_3134_3 HRGMv2_3134_3_10 9443 10369 + 3.A.1.1.29
NULL(UNKNOWN) HRGMv2_3134_3 HRGMv2_3134_3_11 10406 12232 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3134_3 HRGMv2_3134_3_12 12319 14118 - 8.A.59.2.1
TF HRGMv2_3134_3 HRGMv2_3134_3_13 14121 15674 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_3134_3 HRGMv2_3134_3_14 15862 18936 - GH2
CAZyme HRGMv2_3134_3 HRGMv2_3134_3_15 18956 19762 - CE4
Gene ID: HRGMv2_3134_3_7
Type: CAZyme
Location: 4498 - 6069 (-)
Gene ID: HRGMv2_3134_3_8
Type: CAZyme
Location: 6117 - 8168 (-)
Gene ID: HRGMv2_3134_3_9
Type: TC
Location: 8464 - 9417 (+)
Gene ID: HRGMv2_3134_3_10
Type: TC
Location: 9443 - 10369 (+)
Gene ID: HRGMv2_3134_3_11
Type:
Location: 10406 - 12232 (+)
Gene ID: HRGMv2_3134_3_12
Type: TC
Location: 12319 - 14118 (-)
Gene ID: HRGMv2_3134_3_13
Type: TF
Location: 14121 - 15674 (-)
Gene ID: HRGMv2_3134_3_14
Type: CAZyme
Location: 15862 - 18936 (-)
Gene ID: HRGMv2_3134_3_15
Type: CAZyme
Location: 18956 - 19762 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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