PROTEIN: HRGMv2_3134_3_11
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Protein File & Metadata
Source:
HRGMv2_3134_3_11.pdb
Genome ID:
Protein ID:
HRGMv2_3134_3_11
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Protein Sequence
MLKKLTSALL CVAMLASIIG GCSDSTSSSG SSGDTSSSGA SQSSESSEGT AEASETTYDE 60 FLTIDVYDAQ ANYSGIQGGW VGEIIKEKFN MELNIISEDG STFQTRSAAG NLGDIVLASA 120 QGGQLQDLVT AGLIQDMTPY LDGQETLESY MNAIETTSSL VEEDGLWAVP SEVSTRSATE 180 PLGGTDPNSG AYIRWDLYKE LGYPEMETLE DLLPVLQDMQ EIAGTSDSGQ PVYAISLFKD 240 WDSNGMGNAG AFTSWYGYDS VNYAMFKADG SGEIEDMLSK DSEYMRALKF LFQANQMGLV 300 DPESTTQNYD TLVGKYQDGS VLLGLFPWMS ATYYNTDAHL SEGKGMYMAE IKDQTIRQWG 360 CYDEGNTEIV AMVGSKAQDP QRMVDFINWL YSSEGISVCV SRYCGPENVL YTVEDDGPVL 420 TDLGKECFID GDGTMPEEYG GGSWLDGSAQ FSYKIVSAGE INPDTGYTYD PTLWDSYSEL 480 NTNPVLEDWQ EHMGATNPVE YINENGQAMT SPGISFVSEP DSTEIETLRS QINSVVVENS 540 WKAVFASSEE EFDSYIDNMI ETANGLGYAD VFAVDKANAE ARNGHSGLKR QILDPFHFLK 600 SLSHLASI 608
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133D019-F1-model_v4 | 2 | 588 | 11 | 485 | 0.6067 |
0.7029 |
| AF-Q8DRJ6-F1-model_v4 | 59 | 601 | 59 | 514 | 0.5348 |
0.6591 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 56 | 588 | 42 | 505 | 0.6119 |
0.7376 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 56 | 588 | 42 | 505 | 0.6119 |
0.7376 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3omb-assembly1.cif.gz_A | 57 | 588 | 3 | 503 | 0.6832 |
0.7655 |
| 6fth-assembly1.cif.gz_A | 58 | 591 | 1 | 496 | 0.682 |
0.7663 |
| 5g5y-assembly1.cif.gz_A | 58 | 592 | 1 | 494 | 0.681 |
0.7677 |
| 5g62-assembly2.cif.gz_B | 62 | 592 | 1 | 491 | 0.6801 |
0.7686 |
| 5xs8-assembly1.cif.gz_A | 61 | 585 | 1 | 474 | 0.6794 |
0.7786 |
| 4tqu-assembly1.cif.gz_Q | 52 | 601 | 1 | 492 | 0.6611 |
0.7474 |
| 5h6u-assembly1.cif.gz_A | 54 | 588 | 1 | 487 | 0.6572 |
0.7461 |
| 6jhx-assembly2.cif.gz_B | 52 | 588 | 1 | 483 | 0.6549 |
0.7459 |
| 5suo-assembly1.cif.gz_A | 60 | 591 | 1 | 451 | 0.6378 |
0.7465 |
| 5swa-assembly1.cif.gz_A | 62 | 588 | 1 | 448 | 0.5805 |
0.6836 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H2URD6-F1-model_v4 | 54 | 593 | 40 | 538 | 0.6637 |
0.7706 |
| AF-P37966-F1-model_v4 | 57 | 588 | 31 | 502 | 0.6351 |
0.7512 |
| AF-Q795R2-F1-model_v4 | 55 | 588 | 36 | 498 | 0.6164 |
0.7388 |