Cluster: HRGMv2_3132_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3132
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3132_5 | HRGMv2_3132_5_2 | 571 | 2334 | - | GH63 |
| pfam | HRGMv2_3132_5 | HRGMv2_3132_5_3 | 2345 | 3418 | - | Aldo_ket_red |
| TC | HRGMv2_3132_5 | HRGMv2_3132_5_4 | 3437 | 4951 | - | 3.A.1.2.26 |
| TC | HRGMv2_3132_5 | HRGMv2_3132_5_5 | 4971 | 5948 | - | 3.A.1.2.19 |
Gene ID: HRGMv2_3132_5_2
Type: CAZyme
Location: 571 - 2334 (-)
Type: CAZyme
Location: 571 - 2334 (-)
Gene ID: HRGMv2_3132_5_3
Type: pfam
Location: 2345 - 3418 (-)
Type: pfam
Location: 2345 - 3418 (-)
Gene ID: HRGMv2_3132_5_4
Type: TC
Location: 3437 - 4951 (-)
Type: TC
Location: 3437 - 4951 (-)
Gene ID: HRGMv2_3132_5_5
Type: TC
Location: 4971 - 5948 (-)
Type: TC
Location: 4971 - 5948 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium sp018380115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.