Cluster: HRGMv2_3132_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3132
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3132_4 | HRGMv2_3132_4_78 | 67565 | 68746 | + | 2.A.37.3.3 |
| pfam | HRGMv2_3132_4 | HRGMv2_3132_4_79 | 68796 | 69659 | + | Patatin | DUF6363 |
| TC | HRGMv2_3132_4 | HRGMv2_3132_4_80 | 70173 | 70898 | + | 3.A.1.147.6 |
| TC | HRGMv2_3132_4 | HRGMv2_3132_4_81 | 70891 | 72471 | + | 3.A.1.147.6 |
| NULL(UNKNOWN) | HRGMv2_3132_4 | HRGMv2_3132_4_82 | 72485 | 72922 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3132_4 | HRGMv2_3132_4_83 | 72962 | 74218 | + | GT76 |
Gene ID: HRGMv2_3132_4_78
Type: TC
Location: 67565 - 68746 (+)
Type: TC
Location: 67565 - 68746 (+)
Gene ID: HRGMv2_3132_4_79
Type: pfam
Location: 68796 - 69659 (+)
Type: pfam
Location: 68796 - 69659 (+)
Gene ID: HRGMv2_3132_4_80
Type: TC
Location: 70173 - 70898 (+)
Type: TC
Location: 70173 - 70898 (+)
Gene ID: HRGMv2_3132_4_81
Type: TC
Location: 70891 - 72471 (+)
Type: TC
Location: 70891 - 72471 (+)
Gene ID: HRGMv2_3132_4_82
Type:
Location: 72485 - 72922 (+)
Type:
Location: 72485 - 72922 (+)
Gene ID: HRGMv2_3132_4_83
Type: CAZyme
Location: 72962 - 74218 (+)
Type: CAZyme
Location: 72962 - 74218 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium sp018380115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3132_4_78 | vegetarian > vegan | 1.18759 | 0.02695 |