Cluster: HRGMv2_3132_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3132
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3132_39 | HRGMv2_3132_39_10 | 10240 | 11331 | - | 9.B.10.1.1 |
| pfam | HRGMv2_3132_39 | HRGMv2_3132_39_11 | 11386 | 12006 | - | Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_8 |
| peptidase | HRGMv2_3132_39 | HRGMv2_3132_39_12 | 11999 | 13048 | - | M42.UPW |
| CAZyme | HRGMv2_3132_39 | HRGMv2_3132_39_13 | 13210 | 14013 | - | GT2 |
| TC | HRGMv2_3132_39 | HRGMv2_3132_39_14 | 14069 | 15847 | - | 3.A.1.106.2 |
Gene ID: HRGMv2_3132_39_10
Type: TC
Location: 10240 - 11331 (-)
Type: TC
Location: 10240 - 11331 (-)
Gene ID: HRGMv2_3132_39_11
Type: pfam
Location: 11386 - 12006 (-)
Type: pfam
Location: 11386 - 12006 (-)
Gene ID: HRGMv2_3132_39_12
Type: peptidase
Location: 11999 - 13048 (-)
Type: peptidase
Location: 11999 - 13048 (-)
Gene ID: HRGMv2_3132_39_13
Type: CAZyme
Location: 13210 - 14013 (-)
Type: CAZyme
Location: 13210 - 14013 (-)
Gene ID: HRGMv2_3132_39_14
Type: TC
Location: 14069 - 15847 (-)
Type: TC
Location: 14069 - 15847 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium sp018380115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.