Cluster: HRGMv2_3132_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3132
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3132_20 | HRGMv2_3132_20_1 | 3 | 1619 | + | 3.A.24.1.1 |
| TC | HRGMv2_3132_20 | HRGMv2_3132_20_2 | 1990 | 3315 | - | 2.A.66.1.26 |
| TF | HRGMv2_3132_20 | HRGMv2_3132_20_3 | 3474 | 4280 | - | MerR |
| TC | HRGMv2_3132_20 | HRGMv2_3132_20_4 | 4412 | 5263 | + | 3.A.1.126.1 |
| NULL(UNKNOWN) | HRGMv2_3132_20 | HRGMv2_3132_20_5 | 5260 | 5913 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3132_20 | HRGMv2_3132_20_6 | 5965 | 6633 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3132_20 | HRGMv2_3132_20_7 | 6743 | 8431 | - | GH32 |
Gene ID: HRGMv2_3132_20_1
Type: TC
Location: 3 - 1619 (+)
Type: TC
Location: 3 - 1619 (+)
Gene ID: HRGMv2_3132_20_2
Type: TC
Location: 1990 - 3315 (-)
Type: TC
Location: 1990 - 3315 (-)
Gene ID: HRGMv2_3132_20_3
Type: TF
Location: 3474 - 4280 (-)
Type: TF
Location: 3474 - 4280 (-)
Gene ID: HRGMv2_3132_20_4
Type: TC
Location: 4412 - 5263 (+)
Type: TC
Location: 4412 - 5263 (+)
Gene ID: HRGMv2_3132_20_5
Type:
Location: 5260 - 5913 (+)
Type:
Location: 5260 - 5913 (+)
Gene ID: HRGMv2_3132_20_6
Type:
Location: 5965 - 6633 (+)
Type:
Location: 5965 - 6633 (+)
Gene ID: HRGMv2_3132_20_7
Type: CAZyme
Location: 6743 - 8431 (-)
Type: CAZyme
Location: 6743 - 8431 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium sp018380115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.