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Cluster: HRGMv2_3132_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3132_9 HRGMv2_3132_9_37 39687 40736 + 9.B.18.2.1
pfam HRGMv2_3132_9 HRGMv2_3132_9_38 40782 41915 + Epimerase | Polysacc_synt_C
pfam HRGMv2_3132_9 HRGMv2_3132_9_39 41978 43117 + Epimerase_2
CAZyme HRGMv2_3132_9 HRGMv2_3132_9_40 43235 44470 + GT4
CAZyme HRGMv2_3132_9 HRGMv2_3132_9_41 44483 45214 + GT2
pfam HRGMv2_3132_9 HRGMv2_3132_9_42 45211 45612 + DUF2304
TC HRGMv2_3132_9 HRGMv2_3132_9_43 45688 47160 + 2.A.50.2.1
NULL(UNKNOWN) HRGMv2_3132_9 HRGMv2_3132_9_44 47176 48408 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3132_9 HRGMv2_3132_9_45 48747 50117 - 2.A.35.2.3
Gene ID: HRGMv2_3132_9_37
Type: TC
Location: 39687 - 40736 (+)
Gene ID: HRGMv2_3132_9_38
Type: pfam
Location: 40782 - 41915 (+)
Gene ID: HRGMv2_3132_9_39
Type: pfam
Location: 41978 - 43117 (+)
Gene ID: HRGMv2_3132_9_40
Type: CAZyme
Location: 43235 - 44470 (+)
Gene ID: HRGMv2_3132_9_41
Type: CAZyme
Location: 44483 - 45214 (+)
Gene ID: HRGMv2_3132_9_42
Type: pfam
Location: 45211 - 45612 (+)
Gene ID: HRGMv2_3132_9_43
Type: TC
Location: 45688 - 47160 (+)
Gene ID: HRGMv2_3132_9_44
Type:
Location: 47176 - 48408 (+)
Gene ID: HRGMv2_3132_9_45
Type: TC
Location: 48747 - 50117 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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