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Cluster: HRGMv2_3132_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3132_6 HRGMv2_3132_6_23 22771 23469 + 2.A.78.1.1
TC HRGMv2_3132_6 HRGMv2_3132_6_24 23466 23795 + 2.A.78.1.1
TC HRGMv2_3132_6 HRGMv2_3132_6_25 23880 26285 + 3.A.3.23.2
CAZyme HRGMv2_3132_6 HRGMv2_3132_6_26 26254 27324 + GT2
NULL(UNKNOWN) HRGMv2_3132_6 HRGMv2_3132_6_27 27317 28015 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3132_6 HRGMv2_3132_6_28 28090 28713 + Flavin_Reduct | RUBY_RBDX
TC HRGMv2_3132_6 HRGMv2_3132_6_29 28783 29997 - 3.A.1.12.9
TC HRGMv2_3132_6 HRGMv2_3132_6_30 29978 31855 - 3.A.1.12.6
Gene ID: HRGMv2_3132_6_23
Type: TC
Location: 22771 - 23469 (+)
Gene ID: HRGMv2_3132_6_24
Type: TC
Location: 23466 - 23795 (+)
Gene ID: HRGMv2_3132_6_25
Type: TC
Location: 23880 - 26285 (+)
Gene ID: HRGMv2_3132_6_26
Type: CAZyme
Location: 26254 - 27324 (+)
Gene ID: HRGMv2_3132_6_27
Type:
Location: 27317 - 28015 (+)
Gene ID: HRGMv2_3132_6_28
Type: pfam
Location: 28090 - 28713 (+)
Gene ID: HRGMv2_3132_6_29
Type: TC
Location: 28783 - 29997 (-)
Gene ID: HRGMv2_3132_6_30
Type: TC
Location: 29978 - 31855 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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