Cluster: HRGMv2_3130_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3130
- CGC Family ID: CGCFAM_00172
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3130_2 | HRGMv2_3130_2_26 | 21074 | 22834 | - | 3.A.1.134.9 |
| TC | HRGMv2_3130_2 | HRGMv2_3130_2_27 | 23047 | 23814 | - | 3.A.1.134.4 |
| CAZyme | HRGMv2_3130_2 | HRGMv2_3130_2_28 | 23817 | 24581 | - | GT51 |
Gene ID: HRGMv2_3130_2_26
Type: TC
Location: 21074 - 22834 (-)
Type: TC
Location: 21074 - 22834 (-)
Gene ID: HRGMv2_3130_2_27
Type: TC
Location: 23047 - 23814 (-)
Type: TC
Location: 23047 - 23814 (-)
Gene ID: HRGMv2_3130_2_28
Type: CAZyme
Location: 23817 - 24581 (-)
Type: CAZyme
Location: 23817 - 24581 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Avimicrobium
Species
Avimicrobium caecorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.