Cluster: HRGMv2_3130_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3130
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3130_11 | HRGMv2_3130_11_168 | 174135 | 175142 | + | 9.B.146.1.6 |
| TC | HRGMv2_3130_11 | HRGMv2_3130_11_169 | 175173 | 176318 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_3130_11 | HRGMv2_3130_11_170 | 176322 | 177455 | + | GT28 |
Gene ID: HRGMv2_3130_11_168
Type: TC
Location: 174135 - 175142 (+)
Type: TC
Location: 174135 - 175142 (+)
Gene ID: HRGMv2_3130_11_169
Type: TC
Location: 175173 - 176318 (+)
Type: TC
Location: 175173 - 176318 (+)
Gene ID: HRGMv2_3130_11_170
Type: CAZyme
Location: 176322 - 177455 (+)
Type: CAZyme
Location: 176322 - 177455 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Avimicrobium
Species
Avimicrobium caecorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.