Cluster: HRGMv2_3127_CGC27
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 12
- Substrate:
- Genome ID: HRGMv2_3127
- CGC Family ID: CGCFAM_00073
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3127_34 | HRGMv2_3127_34_90 | 105186 | 106304 | + | GT4 |
| CAZyme | HRGMv2_3127_34 | HRGMv2_3127_34_91 | 106324 | 107304 | + | GT2 |
| pfam | HRGMv2_3127_34 | HRGMv2_3127_34_92 | 107329 | 108564 | + | Glyco_trans_1_4 |
| CAZyme | HRGMv2_3127_34 | HRGMv2_3127_34_93 | 108568 | 109833 | + | GT4 |
| CAZyme | HRGMv2_3127_34 | HRGMv2_3127_34_94 | 109830 | 110780 | + | GT2 |
| CAZyme | HRGMv2_3127_34 | HRGMv2_3127_34_95 | 110777 | 111790 | + | GT2 |
| CAZyme | HRGMv2_3127_34 | HRGMv2_3127_34_96 | 111821 | 112822 | + | GT2 |
| CAZyme | HRGMv2_3127_34 | HRGMv2_3127_34_97 | 112859 | 113860 | + | GT2 |
| CAZyme | HRGMv2_3127_34 | HRGMv2_3127_34_98 | 113865 | 115079 | + | GT4 |
| CAZyme | HRGMv2_3127_34 | HRGMv2_3127_34_99 | 115081 | 117237 | + | GT2 | GT4 |
| NULL(UNKNOWN) | HRGMv2_3127_34 | HRGMv2_3127_34_100 | 117280 | 118668 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3127_34 | HRGMv2_3127_34_101 | 118712 | 119767 | + | GT2 |
| TC | HRGMv2_3127_34 | HRGMv2_3127_34_102 | 119852 | 120721 | + | 3.A.1.103.5 |
| TC | HRGMv2_3127_34 | HRGMv2_3127_34_103 | 120737 | 122038 | + | 3.A.1.103.5 |
| CAZyme | HRGMv2_3127_34 | HRGMv2_3127_34_104 | 122041 | 123036 | + | GT100 |
| pfam | HRGMv2_3127_34 | HRGMv2_3127_34_105 | 123181 | 123921 | + | CTP_transf_3 | NTP_transf_3 |
| CAZyme | HRGMv2_3127_34 | HRGMv2_3127_34_106 | 123935 | 124999 | + | GT2 |
Gene ID: HRGMv2_3127_34_90
Type: CAZyme
Location: 105186 - 106304 (+)
Type: CAZyme
Location: 105186 - 106304 (+)
Gene ID: HRGMv2_3127_34_91
Type: CAZyme
Location: 106324 - 107304 (+)
Type: CAZyme
Location: 106324 - 107304 (+)
Gene ID: HRGMv2_3127_34_92
Type: pfam
Location: 107329 - 108564 (+)
Type: pfam
Location: 107329 - 108564 (+)
Gene ID: HRGMv2_3127_34_93
Type: CAZyme
Location: 108568 - 109833 (+)
Type: CAZyme
Location: 108568 - 109833 (+)
Gene ID: HRGMv2_3127_34_94
Type: CAZyme
Location: 109830 - 110780 (+)
Type: CAZyme
Location: 109830 - 110780 (+)
Gene ID: HRGMv2_3127_34_95
Type: CAZyme
Location: 110777 - 111790 (+)
Type: CAZyme
Location: 110777 - 111790 (+)
Gene ID: HRGMv2_3127_34_96
Type: CAZyme
Location: 111821 - 112822 (+)
Type: CAZyme
Location: 111821 - 112822 (+)
Gene ID: HRGMv2_3127_34_97
Type: CAZyme
Location: 112859 - 113860 (+)
Type: CAZyme
Location: 112859 - 113860 (+)
Gene ID: HRGMv2_3127_34_98
Type: CAZyme
Location: 113865 - 115079 (+)
Type: CAZyme
Location: 113865 - 115079 (+)
Gene ID: HRGMv2_3127_34_99
Type: CAZyme
Location: 115081 - 117237 (+)
Type: CAZyme
Location: 115081 - 117237 (+)
Gene ID: HRGMv2_3127_34_100
Type:
Location: 117280 - 118668 (+)
Type:
Location: 117280 - 118668 (+)
Gene ID: HRGMv2_3127_34_101
Type: CAZyme
Location: 118712 - 119767 (+)
Type: CAZyme
Location: 118712 - 119767 (+)
Gene ID: HRGMv2_3127_34_102
Type: TC
Location: 119852 - 120721 (+)
Type: TC
Location: 119852 - 120721 (+)
Gene ID: HRGMv2_3127_34_103
Type: TC
Location: 120737 - 122038 (+)
Type: TC
Location: 120737 - 122038 (+)
Gene ID: HRGMv2_3127_34_104
Type: CAZyme
Location: 122041 - 123036 (+)
Type: CAZyme
Location: 122041 - 123036 (+)
Gene ID: HRGMv2_3127_34_105
Type: pfam
Location: 123181 - 123921 (+)
Type: pfam
Location: 123181 - 123921 (+)
Gene ID: HRGMv2_3127_34_106
Type: CAZyme
Location: 123935 - 124999 (+)
Type: CAZyme
Location: 123935 - 124999 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Fournierella
Species
Fournierella sp002159185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.