PROTEIN: HRGMv2_3127_34_100
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Protein File & Metadata
Source:
HRGMv2_3127_34_100.pdb
Genome ID:
Protein ID:
HRGMv2_3127_34_100
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Protein Sequence
MNNPTISPRL KNGLLLLLLL AVPLVYLSLS FNDSVWTDEA FTMVLLRQDF AGITQGTIAD 60 VHPPLYYYIA KLFTMVFGCS VPVVKVVSIL PVVLTCLLVT GFFRRYFPEH FHSLAFATVF 120 LIGFCPAAFT MNVEIRMYTW GLFFVTLSGL SAYALWARPS SKITLLVFIL SGVCAAFTHY 180 YCVVTECFIY LFLMIALLKK DLRNWKQCVV FCLATVVLYA PWLPIFVRQF SQVRTGWWLE 240 EFALTQITDT VSYLFRGEFV TLFLLLAGVV LVGFAQLLLS RPVRPGAWFA LLCMLTFAGT 300 ILVGYVLSKL IRPLYVDRYM YPACGLLFVG LAIALHQLDQ RLLLRNALVA LLAVNFFFSY 360 PQAIQQEYST GTEEFKAYAA QELTGGETLT TDFQSLTWSI LPYYLPELSV AYTPEISPDL 420 KGLFLTERSL EELQALLPQS HIQEEFTGGI DRQYNFTIYR IS 462
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZP99-F1-model_v4 | 5 | 462 | 14 | 507 | 0.808 |
0.8733 |
| AF-Q9HUZ2-F1-model_v4 | 3 | 462 | 1 | 474 | 0.7787 |
0.815 |
| AF-Q9CC27-F1-model_v4 | 11 | 462 | 29 | 527 | 0.7391 |
0.8207 |
| AF-A0A0K0DXE0-F1-model_v4 | 15 | 462 | 2 | 492 | 0.7307 |
0.7944 |
| AF-O06152-F1-model_v4 | 8 | 462 | 54 | 556 | 0.7251 |
0.8183 |
| AF-A0A0R4IE52-F1-model_v4 | 5 | 462 | 1 | 492 | 0.7212 |
0.7746 |
| AF-Q9BV10-F1-model_v4 | 6 | 462 | 1 | 487 | 0.7212 |
0.7683 |
| AF-Q54PM5-F1-model_v4 | 6 | 462 | 3 | 547 | 0.7185 |
0.8029 |
| AF-Q32DT1-F1-model_v4 | 9 | 462 | 1 | 548 | 0.7154 |
0.8055 |
| AF-B1WBY3-F1-model_v4 | 7 | 462 | 3 | 487 | 0.7154 |
0.7639 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A543NUS7 | GT83 | 11 | 462 | 1 | 475 | 0.7968 |
0.8423 |
| AF-E4NCG6-F1-model_v4 | GT83 | 12 | 462 | 1 | 470 | 0.796 |
0.8393 |
| A1K843 | GT0 | 7 | 462 | 9 | 514 | 0.7938 |
0.8619 |
| AF-A1K843-F1-model_v4 | GT0 | 7 | 462 | 9 | 514 | 0.7938 |
0.8619 |
| A0A0D5CKI4 | GT83 | 12 | 462 | 1 | 476 | 0.7924 |
0.8417 |
| AF-A0A0D5CKI4-F1-model_v4 | GT83 | 12 | 462 | 1 | 476 | 0.7924 |
0.8417 |
| AF-A0A2H5AZW5-F1-model_v4 | GT83 | 8 | 462 | 1 | 471 | 0.7921 |
0.8318 |
| AF-A0A0X3BL36-F1-model_v4 | GT0 | 2 | 461 | 22 | 510 | 0.7889 |
0.8463 |
| AF-A0A7H8KST0-F1-model_v4 | GT83 | 7 | 462 | 2 | 477 | 0.7884 |
0.8295 |
| AF-A0A0H2ZI76-F1-model_v4 | GT83 | 4 | 462 | 1 | 474 | 0.7877 |
0.8249 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q1IJH5 | GT83 | 11 | 462 | 16 | 483 | 0.8121 |
0.8629 |
| A0A543NUS7 | GT83 | 11 | 462 | 1 | 475 | 0.7968 |
0.8423 |
| A0A7D3ZKU3 | GT83 | 16 | 462 | 1 | 460 | 0.7946 |
0.8352 |
| A0A0D5CKI4 | GT83 | 12 | 462 | 1 | 476 | 0.7924 |
0.8417 |
| A0A0F0L4U4 | GT83 | 7 | 462 | 6 | 490 | 0.7874 |
0.8398 |
| H6MRT8 | GT83 | 8 | 462 | 9 | 506 | 0.7844 |
0.85 |
| A0A387BP67 | GT83 | 8 | 462 | 1 | 472 | 0.784 |
0.827 |
| A0A919H1R8 | GT83 | 8 | 462 | 1 | 482 | 0.7839 |
0.8323 |
| UFS57809.1 | GT83 | 11 | 462 | 15 | 480 | 0.7833 |
0.8355 |
| BCY11543.1 | GT83 | 7 | 462 | 6 | 472 | 0.7822 |
0.8228 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ezm-assembly1.cif.gz_A | 8 | 462 | 1 | 530 | 0.6989 |
0.779 |
| 5f15-assembly1.cif.gz_A | 9 | 462 | 1 | 535 | 0.6924 |
0.7759 |
| 8age-assembly1.cif.gz_A | 7 | 462 | 7 | 609 | 0.6387 |
0.7637 |
| 6s7t-assembly1.cif.gz_A | 7 | 462 | 6 | 664 | 0.6164 |
0.7626 |
| 8if8-assembly1.cif.gz_B | 6 | 461 | 61 | 616 | 0.6146 |
0.7269 |
| 3waj-assembly1.cif.gz_A | 12 | 462 | 1 | 750 | 0.5807 |
0.7557 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O67601-F1-model_v4 | 11 | 462 | 1 | 416 | 0.7673 |
0.8247 |
| AF-Q1MLH5-F1-model_v4 | 8 | 462 | 1 | 466 | 0.7372 |
0.7782 |
| AF-O67270-F1-model_v4 | 9 | 462 | 1 | 498 | 0.7323 |
0.7894 |
| AF-B4EUL1-F1-model_v4 | 4 | 462 | 1 | 548 | 0.7245 |
0.8059 |
| AF-Q9BV10-F1-model_v4 | 6 | 462 | 1 | 487 | 0.7212 |
0.7683 |
| AF-B2K5L1-F1-model_v4 | 6 | 462 | 1 | 551 | 0.7208 |
0.8088 |
| AF-Q1C744-F1-model_v4 | 6 | 462 | 1 | 551 | 0.7207 |
0.8088 |
| AF-A4TIM6-F1-model_v4 | 6 | 462 | 1 | 551 | 0.7202 |
0.8082 |
| AF-Q66A06-F1-model_v4 | 6 | 462 | 1 | 551 | 0.7201 |
0.808 |
| AF-Q6D2F3-F1-model_v4 | 6 | 462 | 1 | 552 | 0.7198 |
0.8089 |