Cluster: HRGMv2_3122_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3122
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3122_29 | HRGMv2_3122_29_5 | 2984 | 4057 | + | GT2 |
| pfam | HRGMv2_3122_29 | HRGMv2_3122_29_6 | 4170 | 4811 | + | Hydrolase | HAD | HAD_2 |
| TF | HRGMv2_3122_29 | HRGMv2_3122_29_7 | 5244 | 5504 | - | HTH_3 |
| TC | HRGMv2_3122_29 | HRGMv2_3122_29_8 | 6151 | 8814 | - | 3.A.3.2.21 |
| pfam | HRGMv2_3122_29 | HRGMv2_3122_29_9 | 9177 | 10433 | + | Fe_hyd_lg_C |
| TC | HRGMv2_3122_29 | HRGMv2_3122_29_10 | 10494 | 13568 | - | 9.B.74.1.4 |
| TC | HRGMv2_3122_29 | HRGMv2_3122_29_11 | 13565 | 15712 | - | 2.A.6.7.2 |
Gene ID: HRGMv2_3122_29_5
Type: CAZyme
Location: 2984 - 4057 (+)
Type: CAZyme
Location: 2984 - 4057 (+)
Gene ID: HRGMv2_3122_29_6
Type: pfam
Location: 4170 - 4811 (+)
Type: pfam
Location: 4170 - 4811 (+)
Gene ID: HRGMv2_3122_29_7
Type: TF
Location: 5244 - 5504 (-)
Type: TF
Location: 5244 - 5504 (-)
Gene ID: HRGMv2_3122_29_8
Type: TC
Location: 6151 - 8814 (-)
Type: TC
Location: 6151 - 8814 (-)
Gene ID: HRGMv2_3122_29_9
Type: pfam
Location: 9177 - 10433 (+)
Type: pfam
Location: 9177 - 10433 (+)
Gene ID: HRGMv2_3122_29_10
Type: TC
Location: 10494 - 13568 (-)
Type: TC
Location: 10494 - 13568 (-)
Gene ID: HRGMv2_3122_29_11
Type: TC
Location: 13565 - 15712 (-)
Type: TC
Location: 13565 - 15712 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerotruncus
Species
Anaerotruncus massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.