Cluster: HRGMv2_3122_CGC1
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3122
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3122_1 | HRGMv2_3122_1_25 | 33460 | 34101 | + | 2.A.115.2.6 |
| STP | HRGMv2_3122_1 | HRGMv2_3122_1_26 | 34206 | 34787 | + | TetR_N |
| TC | HRGMv2_3122_1 | HRGMv2_3122_1_27 | 34924 | 35652 | - | 3.A.1.3.25 |
| TC | HRGMv2_3122_1 | HRGMv2_3122_1_28 | 35633 | 36298 | - | 3.A.1.3.25 |
| TC | HRGMv2_3122_1 | HRGMv2_3122_1_29 | 36440 | 37264 | - | 3.A.1.3.25 |
| CAZyme | HRGMv2_3122_1 | HRGMv2_3122_1_30 | 37525 | 39333 | - | GH3 |
| TC | HRGMv2_3122_1 | HRGMv2_3122_1_31 | 39749 | 40993 | + | 3.A.1.4.10 |
| TC | HRGMv2_3122_1 | HRGMv2_3122_1_32 | 41219 | 42118 | + | 3.A.1.4.10 |
| TC | HRGMv2_3122_1 | HRGMv2_3122_1_33 | 42132 | 43199 | + | 3.A.1.4.10 |
| TC | HRGMv2_3122_1 | HRGMv2_3122_1_34 | 43196 | 44062 | + | 3.A.1.4.10 |
| TC | HRGMv2_3122_1 | HRGMv2_3122_1_35 | 44046 | 44747 | + | 3.A.1.4.10 |
| pfam | HRGMv2_3122_1 | HRGMv2_3122_1_36 | 44799 | 45278 | + | tRNA_edit |
| CAZyme | HRGMv2_3122_1 | HRGMv2_3122_1_37 | 45614 | 47242 | - | GH13_20 |
Gene ID: HRGMv2_3122_1_25
Type: TC
Location: 33460 - 34101 (+)
Type: TC
Location: 33460 - 34101 (+)
Gene ID: HRGMv2_3122_1_26
Type: STP
Location: 34206 - 34787 (+)
Type: STP
Location: 34206 - 34787 (+)
Gene ID: HRGMv2_3122_1_27
Type: TC
Location: 34924 - 35652 (-)
Type: TC
Location: 34924 - 35652 (-)
Gene ID: HRGMv2_3122_1_28
Type: TC
Location: 35633 - 36298 (-)
Type: TC
Location: 35633 - 36298 (-)
Gene ID: HRGMv2_3122_1_29
Type: TC
Location: 36440 - 37264 (-)
Type: TC
Location: 36440 - 37264 (-)
Gene ID: HRGMv2_3122_1_30
Type: CAZyme
Location: 37525 - 39333 (-)
Type: CAZyme
Location: 37525 - 39333 (-)
Gene ID: HRGMv2_3122_1_31
Type: TC
Location: 39749 - 40993 (+)
Type: TC
Location: 39749 - 40993 (+)
Gene ID: HRGMv2_3122_1_32
Type: TC
Location: 41219 - 42118 (+)
Type: TC
Location: 41219 - 42118 (+)
Gene ID: HRGMv2_3122_1_33
Type: TC
Location: 42132 - 43199 (+)
Type: TC
Location: 42132 - 43199 (+)
Gene ID: HRGMv2_3122_1_34
Type: TC
Location: 43196 - 44062 (+)
Type: TC
Location: 43196 - 44062 (+)
Gene ID: HRGMv2_3122_1_35
Type: TC
Location: 44046 - 44747 (+)
Type: TC
Location: 44046 - 44747 (+)
Gene ID: HRGMv2_3122_1_36
Type: pfam
Location: 44799 - 45278 (+)
Type: pfam
Location: 44799 - 45278 (+)
Gene ID: HRGMv2_3122_1_37
Type: CAZyme
Location: 45614 - 47242 (-)
Type: CAZyme
Location: 45614 - 47242 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Anaerotruncus
Species
Anaerotruncus massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.