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Cluster: HRGMv2_3117_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3117_15 HRGMv2_3117_15_3 3624 4664 + 9.B.18.2.1
pfam HRGMv2_3117_15 HRGMv2_3117_15_4 4661 5770 + Epimerase | GPI | Polysacc_synt_C
pfam HRGMv2_3117_15 HRGMv2_3117_15_5 5774 6901 + Epimerase_2
CAZyme HRGMv2_3117_15 HRGMv2_3117_15_6 6914 7711 + GT2
NULL(UNKNOWN) HRGMv2_3117_15 HRGMv2_3117_15_7 7708 8982 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3117_15 HRGMv2_3117_15_8 8979 9767 + LicD
CAZyme HRGMv2_3117_15 HRGMv2_3117_15_9 9764 10957 + GT4
NULL(UNKNOWN) HRGMv2_3117_15 HRGMv2_3117_15_10 10967 12205 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3117_15 HRGMv2_3117_15_11 12202 13356 + GT4
Gene ID: HRGMv2_3117_15_3
Type: TC
Location: 3624 - 4664 (+)
Gene ID: HRGMv2_3117_15_4
Type: pfam
Location: 4661 - 5770 (+)
Gene ID: HRGMv2_3117_15_5
Type: pfam
Location: 5774 - 6901 (+)
Gene ID: HRGMv2_3117_15_6
Type: CAZyme
Location: 6914 - 7711 (+)
Gene ID: HRGMv2_3117_15_7
Type:
Location: 7708 - 8982 (+)
Gene ID: HRGMv2_3117_15_8
Type: pfam
Location: 8979 - 9767 (+)
Gene ID: HRGMv2_3117_15_9
Type: CAZyme
Location: 9764 - 10957 (+)
Gene ID: HRGMv2_3117_15_10
Type:
Location: 10967 - 12205 (+)
Gene ID: HRGMv2_3117_15_11
Type: CAZyme
Location: 12202 - 13356 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Oscillospiraceae
→
Genus
Faecousia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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