PROTEIN: HRGMv2_3117_15_10
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Protein File & Metadata
Source:
HRGMv2_3117_15_10.pdb
Genome ID:
Protein ID:
HRGMv2_3117_15_10
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Protein Sequence
MNHTHKSWEL PLLLLLFLFG LGAWDQAGVC FLLLVAASLV LWRVRFSPSE VLLLAFSLAY 60 FVADGYYCGF SIRGCILYLI GPWAAYRLGR CYALEAGSPR SFEALLAAPS LGMALHGLLN 120 WLACLLWQGE PLPGRTAVDI WRGEPVSVTC TGMLLTAAAA LSLGVLAAPY PRGVKWAARI 180 CLVACLGESV YFANRTLPLL CILLLAARAL GWLLHSGVSG RNKLGRCCLF GFAAFLLALI 240 LQVDFLGLRH RLAALPLFLR LQRPETGVSR LEIWLSFFRD GRWLRFPLGG NRLTQGLPYS 300 WFHNLWLDLY HQGGLLPFLL FSLFTLGELC HSLRFFLRKK TRHWERSAIL AAHLLPALWL 360 NAMVEPVMEA NVYVFLSMLL FLGAMRGYAL QSPRAQSTGS ISSFPGQEVP RL 412
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P26471-F1-model_v4 | 4 | 395 | 13 | 404 | 0.6876 |
0.7384 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q51524-F1-model_v4 | GT0 | 1 | 394 | 4 | 403 | 0.6059 |
0.6867 |
| AF-B5YD26-F1-model_v4 | GT9 | 5 | 411 | 42 | 715 | 0.5714 |
0.7625 |
| AF-B8DZR6-F1-model_v4 | GT9 | 5 | 412 | 42 | 716 | 0.5668 |
0.7548 |
| AF-A0A3Q9NIF5-F1-model_v4 | GT2 | 5 | 412 | 1 | 483 | 0.5545 |
0.6999 |
| AF-A0A0K1UBS5-F1-model_v4 | GT2 | 4 | 412 | 3 | 467 | 0.5482 |
0.692 |
| AF-A0A6C0U049-F1-model_v4 | GT2 | 5 | 412 | 4 | 467 | 0.5454 |
0.69 |
| AF-E4PMS8-F1-model_v4 | GT2 | 4 | 412 | 3 | 465 | 0.5406 |
0.6821 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 6 | 412 | 21 | 471 | 0.5404 |
0.712 |
| UII34295.1 | GT4 | 4 | 397 | 13 | 422 | 0.5361 |
0.7358 |
| AF-K0J022-F1-model_v4 | GT4 | 2 | 404 | 1 | 760 | 0.5116 |
0.6825 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| B5YD26 | GT9 | 5 | 411 | 42 | 715 | 0.5714 |
0.7625 |
| USX27957.1 | GT9 | 1 | 406 | 10 | 448 | 0.5477 |
0.7246 |
| A0A0C5WHY3 | GT4 | 4 | 412 | 3 | 679 | 0.5475 |
0.72 |
| D5MJ04 | GT9 | 4 | 412 | 23 | 575 | 0.5473 |
0.725 |
| QSP96058.1 | GT2 | 4 | 411 | 5 | 470 | 0.5472 |
0.6934 |
| A0A517MXC4 | GT26 | 6 | 412 | 21 | 471 | 0.5404 |
0.712 |
| UII34295.1 | GT4 | 4 | 397 | 13 | 422 | 0.5361 |
0.7358 |
| K0J022 | GT4 | 2 | 404 | 1 | 760 | 0.5116 |
0.6825 |
| A0A5B7R2V6 | GH5_39 | 6 | 400 | 383 | 795 | 0.4389 |
0.6077 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P26471-F1-model_v4 | 4 | 395 | 13 | 404 | 0.6876 |
0.7384 |
| AF-O67472-F1-model_v4 | 2 | 394 | 1 | 388 | 0.6429 |
0.6886 |
| AF-Q02729-F1-model_v4 | 4 | 397 | 4 | 408 | 0.642 |
0.7055 |