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Cluster: HRGMv2_3103_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3103_2 HRGMv2_3103_2_163 184352 185437 - GH113
pfam HRGMv2_3103_2 HRGMv2_3103_2_164 185657 186943 + GHMP_kinases_N | GalKase_gal_bdg
CAZyme HRGMv2_3103_2 HRGMv2_3103_2_165 187062 188084 + GH18
pfam HRGMv2_3103_2 HRGMv2_3103_2_166 188259 188684 + RNHCP
NULL(UNKNOWN) HRGMv2_3103_2 HRGMv2_3103_2_167 188831 189271 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3103_2 HRGMv2_3103_2_168 189295 190272 - 2.A.119.1.3
TF HRGMv2_3103_2 HRGMv2_3103_2_169 190514 191566 + HTH_DeoR
pfam HRGMv2_3103_2 HRGMv2_3103_2_170 191563 192144 + GrpE
TC HRGMv2_3103_2 HRGMv2_3103_2_171 192215 194062 + 1.A.33.1.4
sulfatase HRGMv2_3103_2 HRGMv2_3103_2_172 194160 195323 + S1_7
pfam HRGMv2_3103_2 HRGMv2_3103_2_173 195401 196384 + 2-Hacid_dh | 2-Hacid_dh_C | NAD_binding_2
TC HRGMv2_3103_2 HRGMv2_3103_2_174 196620 198092 - 3.A.1.121.3
Gene ID: HRGMv2_3103_2_163
Type: CAZyme
Location: 184352 - 185437 (-)
Gene ID: HRGMv2_3103_2_164
Type: pfam
Location: 185657 - 186943 (+)
Gene ID: HRGMv2_3103_2_165
Type: CAZyme
Location: 187062 - 188084 (+)
Gene ID: HRGMv2_3103_2_166
Type: pfam
Location: 188259 - 188684 (+)
Gene ID: HRGMv2_3103_2_167
Type:
Location: 188831 - 189271 (-)
Gene ID: HRGMv2_3103_2_168
Type: TC
Location: 189295 - 190272 (-)
Gene ID: HRGMv2_3103_2_169
Type: TF
Location: 190514 - 191566 (+)
Gene ID: HRGMv2_3103_2_170
Type: pfam
Location: 191563 - 192144 (+)
Gene ID: HRGMv2_3103_2_171
Type: TC
Location: 192215 - 194062 (+)
Gene ID: HRGMv2_3103_2_172
Type: sulfatase
Location: 194160 - 195323 (+)
Gene ID: HRGMv2_3103_2_173
Type: pfam
Location: 195401 - 196384 (+)
Gene ID: HRGMv2_3103_2_174
Type: TC
Location: 196620 - 198092 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
UBA866
→
Species
UBA866 sp900543295

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3103_2_165 vegetarian > vegan 1.42801 0.00224
HRGMv2_3103_2_168 vegetarian > vegan 1.97173 0.00224
HRGMv2_3103_2_173 vegetarian > vegan 1.05228 0.00224

🧭 Explore Read Mapping of CGC

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