Cluster: HRGMv2_3103_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3103
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3103_2 | HRGMv2_3103_2_113 | 122878 | 124170 | - | 2.A.1.21.23 |
| pfam | HRGMv2_3103_2 | HRGMv2_3103_2_114 | 124379 | 124750 | - | YjbR |
| CAZyme | HRGMv2_3103_2 | HRGMv2_3103_2_115 | 124769 | 126655 | - | GH51_2 |
| TF | HRGMv2_3103_2 | HRGMv2_3103_2_116 | 126686 | 127264 | - | LexA_DNA_bind |
| NULL(UNKNOWN) | HRGMv2_3103_2 | HRGMv2_3103_2_117 | 127540 | 128124 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3103_2 | HRGMv2_3103_2_118 | 128125 | 130005 | - | 3.A.1.135.6 |
| TC | HRGMv2_3103_2 | HRGMv2_3103_2_119 | 130002 | 132218 | - | 3.A.1.135.6 |
Gene ID: HRGMv2_3103_2_113
Type: TC
Location: 122878 - 124170 (-)
Type: TC
Location: 122878 - 124170 (-)
Gene ID: HRGMv2_3103_2_114
Type: pfam
Location: 124379 - 124750 (-)
Type: pfam
Location: 124379 - 124750 (-)
Gene ID: HRGMv2_3103_2_115
Type: CAZyme
Location: 124769 - 126655 (-)
Type: CAZyme
Location: 124769 - 126655 (-)
Gene ID: HRGMv2_3103_2_116
Type: TF
Location: 126686 - 127264 (-)
Type: TF
Location: 126686 - 127264 (-)
Gene ID: HRGMv2_3103_2_117
Type:
Location: 127540 - 128124 (-)
Type:
Location: 127540 - 128124 (-)
Gene ID: HRGMv2_3103_2_118
Type: TC
Location: 128125 - 130005 (-)
Type: TC
Location: 128125 - 130005 (-)
Gene ID: HRGMv2_3103_2_119
Type: TC
Location: 130002 - 132218 (-)
Type: TC
Location: 130002 - 132218 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA866
Species
UBA866 sp900543295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.