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Cluster: HRGMv2_3103_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3103_2 HRGMv2_3103_2_100 108525 110783 - GT51
NULL(UNKNOWN) HRGMv2_3103_2 HRGMv2_3103_2_101 110997 111311 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3103_2 HRGMv2_3103_2_102 111674 114085 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3103_2 HRGMv2_3103_2_103 114082 114963 + 3.A.1.148.3
pfam HRGMv2_3103_2 HRGMv2_3103_2_104 115202 115381 - DUF1540
pfam HRGMv2_3103_2 HRGMv2_3103_2_105 115584 116309 - SIR2
TC HRGMv2_3103_2 HRGMv2_3103_2_106 116403 117080 - 2.A.122.1.4
TC HRGMv2_3103_2 HRGMv2_3103_2_107 117073 117456 - 1.E.14.1.6
Gene ID: HRGMv2_3103_2_100
Type: CAZyme
Location: 108525 - 110783 (-)
Gene ID: HRGMv2_3103_2_101
Type:
Location: 110997 - 111311 (+)
Gene ID: HRGMv2_3103_2_102
Type:
Location: 111674 - 114085 (+)
Gene ID: HRGMv2_3103_2_103
Type: TC
Location: 114082 - 114963 (+)
Gene ID: HRGMv2_3103_2_104
Type: pfam
Location: 115202 - 115381 (-)
Gene ID: HRGMv2_3103_2_105
Type: pfam
Location: 115584 - 116309 (-)
Gene ID: HRGMv2_3103_2_106
Type: TC
Location: 116403 - 117080 (-)
Gene ID: HRGMv2_3103_2_107
Type: TC
Location: 117073 - 117456 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
UBA866
→
Species
UBA866 sp900543295

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3103_2_101 vegetarian > vegan 1.26108 0.00224
HRGMv2_3103_2_103 vegetarian > vegan 3.76715 0.00224

🧭 Explore Read Mapping of CGC

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