Cluster: HRGMv2_3103_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3103
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3103_1 | HRGMv2_3103_1_469 | 472256 | 474058 | - | GH143 |
| pfam | HRGMv2_3103_1 | HRGMv2_3103_1_470 | 474452 | 475786 | - | FAD_binding_2 | GIDA | DAO | FAD_binding_3 | Amino_oxidase | Thi4 | FAD_oxidored | NAD_binding_8 |
| TC | HRGMv2_3103_1 | HRGMv2_3103_1_471 | 475963 | 477894 | - | 3.A.1.135.5 |
| TC | HRGMv2_3103_1 | HRGMv2_3103_1_472 | 477881 | 479638 | - | 3.A.1.135.5 |
Gene ID: HRGMv2_3103_1_469
Type: CAZyme
Location: 472256 - 474058 (-)
Type: CAZyme
Location: 472256 - 474058 (-)
Gene ID: HRGMv2_3103_1_470
Type: pfam
Location: 474452 - 475786 (-)
Type: pfam
Location: 474452 - 475786 (-)
Gene ID: HRGMv2_3103_1_471
Type: TC
Location: 475963 - 477894 (-)
Type: TC
Location: 475963 - 477894 (-)
Gene ID: HRGMv2_3103_1_472
Type: TC
Location: 477881 - 479638 (-)
Type: TC
Location: 477881 - 479638 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA866
Species
UBA866 sp900543295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.