Cluster: HRGMv2_3103_CGC34
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3103
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3103_15 | HRGMv2_3103_15_1 | 421 | 1800 | + | 2.A.38.4.3 |
| TC | HRGMv2_3103_15 | HRGMv2_3103_15_2 | 1908 | 3710 | + | 2.A.58.2.2 |
| pfam | HRGMv2_3103_15 | HRGMv2_3103_15_3 | 4059 | 4712 | + | ThuA |
| pfam | HRGMv2_3103_15 | HRGMv2_3103_15_4 | 4718 | 5494 | + | AP_endonuc_2 |
| CAZyme | HRGMv2_3103_15 | HRGMv2_3103_15_5 | 5782 | 12060 | + | GH85 |
| CAZyme | HRGMv2_3103_15 | HRGMv2_3103_15_6 | 12551 | 18418 | + | GH85 |
| TC | HRGMv2_3103_15 | HRGMv2_3103_15_7 | 19014 | 21044 | + | 2.A.66.1.37 |
| NULL(UNKNOWN) | HRGMv2_3103_15 | HRGMv2_3103_15_8 | 21266 | 21460 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3103_15 | HRGMv2_3103_15_9 | 21859 | 22440 | + | DUF4368 |
| CAZyme | HRGMv2_3103_15 | HRGMv2_3103_15_10 | 22557 | 24701 | - | GH92 |
| TC | HRGMv2_3103_15 | HRGMv2_3103_15_11 | 24951 | 26684 | + | 8.A.59.2.1 |
Gene ID: HRGMv2_3103_15_1
Type: TC
Location: 421 - 1800 (+)
Type: TC
Location: 421 - 1800 (+)
Gene ID: HRGMv2_3103_15_2
Type: TC
Location: 1908 - 3710 (+)
Type: TC
Location: 1908 - 3710 (+)
Gene ID: HRGMv2_3103_15_3
Type: pfam
Location: 4059 - 4712 (+)
Type: pfam
Location: 4059 - 4712 (+)
Gene ID: HRGMv2_3103_15_4
Type: pfam
Location: 4718 - 5494 (+)
Type: pfam
Location: 4718 - 5494 (+)
Gene ID: HRGMv2_3103_15_5
Type: CAZyme
Location: 5782 - 12060 (+)
Type: CAZyme
Location: 5782 - 12060 (+)
Gene ID: HRGMv2_3103_15_6
Type: CAZyme
Location: 12551 - 18418 (+)
Type: CAZyme
Location: 12551 - 18418 (+)
Gene ID: HRGMv2_3103_15_7
Type: TC
Location: 19014 - 21044 (+)
Type: TC
Location: 19014 - 21044 (+)
Gene ID: HRGMv2_3103_15_8
Type:
Location: 21266 - 21460 (+)
Type:
Location: 21266 - 21460 (+)
Gene ID: HRGMv2_3103_15_9
Type: pfam
Location: 21859 - 22440 (+)
Type: pfam
Location: 21859 - 22440 (+)
Gene ID: HRGMv2_3103_15_10
Type: CAZyme
Location: 22557 - 24701 (-)
Type: CAZyme
Location: 22557 - 24701 (-)
Gene ID: HRGMv2_3103_15_11
Type: TC
Location: 24951 - 26684 (+)
Type: TC
Location: 24951 - 26684 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA866
Species
UBA866 sp900543295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.