Cluster: HRGMv2_3103_CGC3
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3103
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3103_1 | HRGMv2_3103_1_332 | 328278 | 329261 | + | GH29 |
| TF | HRGMv2_3103_1 | HRGMv2_3103_1_333 | 329467 | 329757 | + | HTH_3 |
| NULL(UNKNOWN) | HRGMv2_3103_1 | HRGMv2_3103_1_334 | 330405 | 330572 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3103_1 | HRGMv2_3103_1_335 | 330694 | 332076 | + | 2.A.40.7.6 |
| pfam | HRGMv2_3103_1 | HRGMv2_3103_1_336 | 332553 | 333776 | + | tRNA-synt_1b | S4 | SYY_C-terminal |
| CAZyme | HRGMv2_3103_1 | HRGMv2_3103_1_337 | 333870 | 334814 | - | GH179 |
| CAZyme | HRGMv2_3103_1 | HRGMv2_3103_1_338 | 334832 | 336025 | - | GT4 |
| TF | HRGMv2_3103_1 | HRGMv2_3103_1_339 | 336107 | 336847 | - | HTH_3 |
| peptidase | HRGMv2_3103_1 | HRGMv2_3103_1_340 | 336861 | 337718 | - | A36.UPW |
| TC | HRGMv2_3103_1 | HRGMv2_3103_1_341 | 337880 | 338704 | + | 1.A.23.2.2 |
Gene ID: HRGMv2_3103_1_332
Type: CAZyme
Location: 328278 - 329261 (+)
Type: CAZyme
Location: 328278 - 329261 (+)
Gene ID: HRGMv2_3103_1_333
Type: TF
Location: 329467 - 329757 (+)
Type: TF
Location: 329467 - 329757 (+)
Gene ID: HRGMv2_3103_1_334
Type:
Location: 330405 - 330572 (+)
Type:
Location: 330405 - 330572 (+)
Gene ID: HRGMv2_3103_1_335
Type: TC
Location: 330694 - 332076 (+)
Type: TC
Location: 330694 - 332076 (+)
Gene ID: HRGMv2_3103_1_336
Type: pfam
Location: 332553 - 333776 (+)
Type: pfam
Location: 332553 - 333776 (+)
Gene ID: HRGMv2_3103_1_337
Type: CAZyme
Location: 333870 - 334814 (-)
Type: CAZyme
Location: 333870 - 334814 (-)
Gene ID: HRGMv2_3103_1_338
Type: CAZyme
Location: 334832 - 336025 (-)
Type: CAZyme
Location: 334832 - 336025 (-)
Gene ID: HRGMv2_3103_1_339
Type: TF
Location: 336107 - 336847 (-)
Type: TF
Location: 336107 - 336847 (-)
Gene ID: HRGMv2_3103_1_340
Type: peptidase
Location: 336861 - 337718 (-)
Type: peptidase
Location: 336861 - 337718 (-)
Gene ID: HRGMv2_3103_1_341
Type: TC
Location: 337880 - 338704 (+)
Type: TC
Location: 337880 - 338704 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA866
Species
UBA866 sp900543295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.