Cluster: HRGMv2_3101_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3101
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3101_38 | HRGMv2_3101_38_7 | 3848 | 4975 | + | 2.A.86.1.5 |
| NULL(UNKNOWN) | HRGMv2_3101_38 | HRGMv2_3101_38_8 | 5202 | 6068 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3101_38 | HRGMv2_3101_38_9 | 6326 | 8341 | + | GH31_4 |
Gene ID: HRGMv2_3101_38_7
Type: TC
Location: 3848 - 4975 (+)
Type: TC
Location: 3848 - 4975 (+)
Gene ID: HRGMv2_3101_38_8
Type:
Location: 5202 - 6068 (-)
Type:
Location: 5202 - 6068 (-)
Gene ID: HRGMv2_3101_38_9
Type: CAZyme
Location: 6326 - 8341 (+)
Type: CAZyme
Location: 6326 - 8341 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.