Cluster: HRGMv2_3101_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3101
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3101_28 | HRGMv2_3101_28_16 | 13375 | 14319 | - | GT2 |
| CAZyme | HRGMv2_3101_28 | HRGMv2_3101_28_17 | 14333 | 15385 | - | GT4 |
| CAZyme | HRGMv2_3101_28 | HRGMv2_3101_28_18 | 15392 | 16546 | - | GT4 |
| TC | HRGMv2_3101_28 | HRGMv2_3101_28_19 | 16573 | 17979 | - | 9.B.18.1.1 |
Gene ID: HRGMv2_3101_28_16
Type: CAZyme
Location: 13375 - 14319 (-)
Type: CAZyme
Location: 13375 - 14319 (-)
Gene ID: HRGMv2_3101_28_17
Type: CAZyme
Location: 14333 - 15385 (-)
Type: CAZyme
Location: 14333 - 15385 (-)
Gene ID: HRGMv2_3101_28_18
Type: CAZyme
Location: 15392 - 16546 (-)
Type: CAZyme
Location: 15392 - 16546 (-)
Gene ID: HRGMv2_3101_28_19
Type: TC
Location: 16573 - 17979 (-)
Type: TC
Location: 16573 - 17979 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.