Cluster: HRGMv2_3101_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3101
- CGC Family ID: CGCFAM_00662
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3101_20 | HRGMv2_3101_20_42 | 42369 | 44189 | + | GH2 |
| CAZyme | HRGMv2_3101_20 | HRGMv2_3101_20_43 | 44319 | 46571 | + | GH3 |
| TC | HRGMv2_3101_20 | HRGMv2_3101_20_44 | 46679 | 48082 | + | 2.A.66.1.32 |
Gene ID: HRGMv2_3101_20_42
Type: CAZyme
Location: 42369 - 44189 (+)
Type: CAZyme
Location: 42369 - 44189 (+)
Gene ID: HRGMv2_3101_20_43
Type: CAZyme
Location: 44319 - 46571 (+)
Type: CAZyme
Location: 44319 - 46571 (+)
Gene ID: HRGMv2_3101_20_44
Type: TC
Location: 46679 - 48082 (+)
Type: TC
Location: 46679 - 48082 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.