Cluster: HRGMv2_3101_CGC28
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3101
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3101_163 | HRGMv2_3101_163_2 | 1239 | 2363 | - | GT28 |
| TC | HRGMv2_3101_163 | HRGMv2_3101_163_3 | 2401 | 3675 | - | 2.A.103.1.4 |
| TC | HRGMv2_3101_163 | HRGMv2_3101_163_4 | 3734 | 4747 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3101_163_2
Type: CAZyme
Location: 1239 - 2363 (-)
Type: CAZyme
Location: 1239 - 2363 (-)
Gene ID: HRGMv2_3101_163_3
Type: TC
Location: 2401 - 3675 (-)
Type: TC
Location: 2401 - 3675 (-)
Gene ID: HRGMv2_3101_163_4
Type: TC
Location: 3734 - 4747 (-)
Type: TC
Location: 3734 - 4747 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.