Cluster: HRGMv2_3101_CGC23
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3101
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3101_124 | HRGMv2_3101_124_4 | 1797 | 2597 | + | 3.A.1.103.6 |
| TC | HRGMv2_3101_124 | HRGMv2_3101_124_5 | 2608 | 3357 | + | 3.A.1.103.1 |
| CAZyme | HRGMv2_3101_124 | HRGMv2_3101_124_6 | 3446 | 5314 | + | GT2 | GT2 |
Gene ID: HRGMv2_3101_124_4
Type: TC
Location: 1797 - 2597 (+)
Type: TC
Location: 1797 - 2597 (+)
Gene ID: HRGMv2_3101_124_5
Type: TC
Location: 2608 - 3357 (+)
Type: TC
Location: 2608 - 3357 (+)
Gene ID: HRGMv2_3101_124_6
Type: CAZyme
Location: 3446 - 5314 (+)
Type: CAZyme
Location: 3446 - 5314 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.