Cluster: HRGMv2_3101_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3101
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3101_3 | HRGMv2_3101_3_1 | 2 | 2599 | - | GH2 |
| TC | HRGMv2_3101_3 | HRGMv2_3101_3_2 | 2952 | 3653 | + | 8.A.3.2.4 |
| TC | HRGMv2_3101_3 | HRGMv2_3101_3_3 | 3653 | 4414 | + | 8.A.3.3.1 |
Gene ID: HRGMv2_3101_3_1
Type: CAZyme
Location: 2 - 2599 (-)
Type: CAZyme
Location: 2 - 2599 (-)
Gene ID: HRGMv2_3101_3_2
Type: TC
Location: 2952 - 3653 (+)
Type: TC
Location: 2952 - 3653 (+)
Gene ID: HRGMv2_3101_3_3
Type: TC
Location: 3653 - 4414 (+)
Type: TC
Location: 3653 - 4414 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.