Cluster: HRGMv2_3101_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3101
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3101_43 | HRGMv2_3101_43_24 | 27695 | 29035 | - | 2.A.66.1.33 |
| TF | HRGMv2_3101_43 | HRGMv2_3101_43_25 | 29232 | 29690 | + | HTH_11 |
| pfam | HRGMv2_3101_43 | HRGMv2_3101_43_26 | 29746 | 31242 | - | FGGY_N | FGGY_C |
| CAZyme | HRGMv2_3101_43 | HRGMv2_3101_43_27 | 31463 | 32587 | + | GH35 |
Gene ID: HRGMv2_3101_43_24
Type: TC
Location: 27695 - 29035 (-)
Type: TC
Location: 27695 - 29035 (-)
Gene ID: HRGMv2_3101_43_25
Type: TF
Location: 29232 - 29690 (+)
Type: TF
Location: 29232 - 29690 (+)
Gene ID: HRGMv2_3101_43_26
Type: pfam
Location: 29746 - 31242 (-)
Type: pfam
Location: 29746 - 31242 (-)
Gene ID: HRGMv2_3101_43_27
Type: CAZyme
Location: 31463 - 32587 (+)
Type: CAZyme
Location: 31463 - 32587 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.