Cluster: HRGMv2_3022_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3022
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3022_9 | HRGMv2_3022_9_34 | 36223 | 37434 | - | CE9 |
| pfam | HRGMv2_3022_9 | HRGMv2_3022_9_35 | 37559 | 37924 | - | Smr |
| NULL(UNKNOWN) | HRGMv2_3022_9 | HRGMv2_3022_9_36 | 37948 | 39255 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3022_9 | HRGMv2_3022_9_37 | 39553 | 41244 | - | 3.A.15.4.1 |
| TC | HRGMv2_3022_9 | HRGMv2_3022_9_38 | 41325 | 42539 | - | 3.A.11.1.3 |
| TC | HRGMv2_3022_9 | HRGMv2_3022_9_39 | 42617 | 43444 | - | 1.A.54.5.3 |
Gene ID: HRGMv2_3022_9_34
Type: CAZyme
Location: 36223 - 37434 (-)
Type: CAZyme
Location: 36223 - 37434 (-)
Gene ID: HRGMv2_3022_9_35
Type: pfam
Location: 37559 - 37924 (-)
Type: pfam
Location: 37559 - 37924 (-)
Gene ID: HRGMv2_3022_9_36
Type:
Location: 37948 - 39255 (-)
Type:
Location: 37948 - 39255 (-)
Gene ID: HRGMv2_3022_9_37
Type: TC
Location: 39553 - 41244 (-)
Type: TC
Location: 39553 - 41244 (-)
Gene ID: HRGMv2_3022_9_38
Type: TC
Location: 41325 - 42539 (-)
Type: TC
Location: 41325 - 42539 (-)
Gene ID: HRGMv2_3022_9_39
Type: TC
Location: 42617 - 43444 (-)
Type: TC
Location: 42617 - 43444 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
HGM12650
Species
HGM12650 sp900761725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.