PROTEIN: HRGMv2_3022_9_36
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Protein File & Metadata
Source:
HRGMv2_3022_9_36.pdb
Genome ID:
Protein ID:
HRGMv2_3022_9_36
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Protein Sequence
MEELNMKKIK HFNFVKKPHK PSFLMGLAKH LISWPDLKKR GAVITKTDMK ELEGKPYLLL 60 VTHSSMVDFN LMLRATHPYP VNNVMTLEGF NTYTEFLMRS LGVLGKRKFI TDINLVRNMK 120 YCLEKLRTIF VLFPEARYSL DGKTSYLPES LGSLVKMLKV PVAVLKIHGN FVTCPQWNKI 180 NKGTYVEAEM FPIVKAWETE DISVDEINGR IKEAFRYDDF AWQYEHKLKI DHPERAKGLH 240 ALLYKCPHCG TESQTDSAGT ELWCNACGKR WEMDEYGRLH AKDGETEFRH IPDWSDWERK 300 CVREEIRNGT YYFEDTVRVE TLPSAKKFYK QGEGRFVQTP DGTVIECNYY GKPYVLKKSP 360 MSLESVHIEY DYLGRGDCVD ISIQDDSFWC YFTKRDVITK LSFATEEIFF LADEKQKERR 420 KRRAEMAAEK SSDDR 435
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9CDC0-F1-model_v4 | 20 | 352 | 1 | 257 | 0.6141 |
0.7837 |
| AF-O07808-F1-model_v4 | 21 | 354 | 1 | 250 | 0.6123 |
0.7912 |
| AF-K0EQL3-F1-model_v4 | 20 | 392 | 1 | 247 | 0.612 |
0.7927 |
| AF-K0EMF3-F1-model_v4 | 22 | 349 | 1 | 248 | 0.6111 |
0.7902 |
| AF-O07809-F1-model_v4 | 20 | 353 | 1 | 254 | 0.6068 |
0.7893 |
| AF-O07807-F1-model_v4 | 22 | 354 | 1 | 256 | 0.6064 |
0.7798 |
| AF-Q5AEL8-F1-model_v4 | 19 | 393 | 39 | 292 | 0.5601 |
0.7736 |
| AF-Q9X7B0-F1-model_v4 | 13 | 418 | 211 | 733 | 0.4197 |
0.5748 |
| AF-C1GUI2-F1-model_v4 | 15 | 430 | 1 | 469 | 0.4162 |
0.4966 |
| AF-P9WI61-F1-model_v4 | 13 | 418 | 219 | 741 | 0.4152 |
0.5723 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| BEI94137.1 | GT4 | 19 | 423 | 32 | 559 | 0.3941 |
0.537 |
| AF-J9VR06-F1-model_v4 | GT4 | 18 | 404 | 32 | 664 | 0.3893 |
0.5593 |
| AF-E6R403-F1-model_v4 | GT4 | 19 | 404 | 32 | 673 | 0.3875 |
0.5605 |
| AF-Q5KIN5-F1-model_v4 | GT4 | 19 | 404 | 32 | 665 | 0.3791 |
0.5452 |
Structural Homologs -
CAZyme-ID50
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P9WI58-F1-model_v4 | 7 | 420 | 17 | 588 | 0.4702 |
0.5848 |
| AF-Q9X7B0-F1-model_v4 | 13 | 418 | 211 | 733 | 0.4197 |
0.5748 |
| AF-B8ZRA3-F1-model_v4 | 13 | 418 | 211 | 733 | 0.4197 |
0.5753 |
| AF-B2HNJ0-F1-model_v4 | 13 | 418 | 215 | 737 | 0.4184 |
0.5767 |
| AF-A5U5H8-F1-model_v4 | 13 | 418 | 219 | 741 | 0.4171 |
0.5746 |
| AF-P9WI60-F1-model_v4 | 13 | 418 | 219 | 741 | 0.4167 |
0.5746 |
| AF-Q7TYH5-F1-model_v4 | 13 | 418 | 219 | 741 | 0.4166 |
0.5741 |
| AF-C1AEU7-F1-model_v4 | 13 | 418 | 219 | 741 | 0.4164 |
0.5742 |
| AF-P9WI61-F1-model_v4 | 13 | 418 | 219 | 741 | 0.4152 |
0.5723 |
| AF-A1KLH6-F1-model_v4 | 13 | 418 | 219 | 741 | 0.4148 |
0.5722 |