Cluster: HRGMv2_3020_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3020
- CGC Family ID: CGCFAM_00263
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3020_16 | HRGMv2_3020_16_48 | 42915 | 44057 | + | GH109 |
| NULL(UNKNOWN) | HRGMv2_3020_16 | HRGMv2_3020_16_49 | 44181 | 45059 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3020_16 | HRGMv2_3020_16_50 | 45193 | 46365 | + | GH179 |
| pfam | HRGMv2_3020_16 | HRGMv2_3020_16_51 | 46505 | 47677 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| TC | HRGMv2_3020_16 | HRGMv2_3020_16_52 | 47918 | 49588 | + | 3.A.1.135.7 |
| TC | HRGMv2_3020_16 | HRGMv2_3020_16_53 | 49581 | 50807 | + | 3.A.1.135.5 |
Gene ID: HRGMv2_3020_16_48
Type: CAZyme
Location: 42915 - 44057 (+)
Type: CAZyme
Location: 42915 - 44057 (+)
Gene ID: HRGMv2_3020_16_49
Type:
Location: 44181 - 45059 (+)
Type:
Location: 44181 - 45059 (+)
Gene ID: HRGMv2_3020_16_50
Type: CAZyme
Location: 45193 - 46365 (+)
Type: CAZyme
Location: 45193 - 46365 (+)
Gene ID: HRGMv2_3020_16_51
Type: pfam
Location: 46505 - 47677 (+)
Type: pfam
Location: 46505 - 47677 (+)
Gene ID: HRGMv2_3020_16_52
Type: TC
Location: 47918 - 49588 (+)
Type: TC
Location: 47918 - 49588 (+)
Gene ID: HRGMv2_3020_16_53
Type: TC
Location: 49581 - 50807 (+)
Type: TC
Location: 49581 - 50807 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-382
Genus
UMGS882
Species
UMGS882 sp003343885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.