PROTEIN: HRGMv2_3020_16_49
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Protein File & Metadata
Source:
HRGMv2_3020_16_49.pdb
Genome ID:
Protein ID:
HRGMv2_3020_16_49
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Protein Sequence
MSENIAYLLV TASTILFACQ FLFQKKYGES EGEGLRASVT LALLSSIVRI ILVVVLYGVS 60 GYSFTLYGFV CSFFAAVSYC CVILFSAGAL KYANMAKYSV YMMLGGMVLP FAAGIAFFSE 120 PLTFGKFAGL LLVAAATCFS NLKAGTKSRG AVKYYIGVFI CNGMNGVISK FNQSSPDGLS 180 ASSFTLLTAA WSVVICAVYL VVSTARSEKK PLFLSARTAL PQAALYGAAC GIGNLLLLIS 240 LEKLPASVQY PLVTGGTIVF STIISVIRRE KLNAAMAISV VLAMISAVAV VL 292
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F3J5-F1-model_v4 | 1 | 292 | 11 | 290 | 0.8574 |
0.915 |
| AF-Q8DPI5-F1-model_v4 | 1 | 292 | 6 | 296 | 0.8565 |
0.8851 |
| AF-A0A0H3GYZ7-F1-model_v4 | 2 | 292 | 1 | 277 | 0.8527 |
0.8966 |
| AF-P14182-F1-model_v4 | 4 | 292 | 1 | 286 | 0.8495 |
0.8884 |
| AF-Q8ZL13-F1-model_v4 | 2 | 292 | 10 | 286 | 0.848 |
0.9038 |
| AF-Q5F951-F1-model_v4 | 7 | 292 | 1 | 282 | 0.8441 |
0.8894 |
| AF-K0F565-F1-model_v4 | 4 | 292 | 1 | 287 | 0.8438 |
0.8702 |
| AF-P44170-F1-model_v4 | 7 | 292 | 1 | 286 | 0.8392 |
0.8731 |
| AF-A0A0H3GK88-F1-model_v4 | 1 | 292 | 4 | 288 | 0.8388 |
0.8819 |
| AF-K0F5D2-F1-model_v4 | 1 | 292 | 7 | 290 | 0.8354 |
0.9005 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 292 | 299 | 664 | 0.6001 |
0.8503 |
| AF-A0A3P6AF83-F1-model_v4 | GH28 | 1 | 292 | 445 | 766 | 0.5574 |
0.8213 |
| AF-A0A7H8KSK8-F1-model_v4 | GT51 | 1 | 292 | 816 | 1109 | 0.5311 |
0.8495 |
| AF-A0A4D6KI88-F1-model_v4 | GH1 | 1 | 292 | 92 | 412 | 0.4845 |
0.7497 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 292 | 299 | 664 | 0.6001 |
0.8503 |
| A0A3P6AF83 | GH28 | 1 | 292 | 445 | 766 | 0.5574 |
0.8213 |
| A0A7H8KSK8 | GT51 | 1 | 292 | 816 | 1109 | 0.5311 |
0.8495 |
| A0A4D6KI88 | GH1 | 1 | 292 | 92 | 412 | 0.4845 |
0.7497 |
| Q5B3N6 | GT25 | 4 | 292 | 515 | 798 | 0.4737 |
0.7175 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5i20-assembly4.cif.gz_D | 2 | 292 | 1 | 280 | 0.8506 |
0.8885 |
| 7paf-assembly1.cif.gz_D | 6 | 291 | 1 | 278 | 0.8484 |
0.8889 |
| 5i20-assembly3.cif.gz_C | 2 | 292 | 1 | 279 | 0.8446 |
0.8877 |
| 5i20-assembly1.cif.gz_A | 2 | 292 | 1 | 282 | 0.8425 |
0.8841 |
| 5i20-assembly2.cif.gz_B | 2 | 292 | 1 | 277 | 0.8382 |
0.8834 |
| 5i20-assembly5.cif.gz_E | 2 | 292 | 1 | 284 | 0.834 |
0.8755 |
| 7b0k-assembly1.cif.gz_A | 6 | 292 | 1 | 255 | 0.8009 |
0.8761 |
| 5ogk-assembly1.cif.gz_B | 1 | 292 | 1 | 288 | 0.7884 |
0.8347 |
| 5ogk-assembly2.cif.gz_C | 1 | 292 | 1 | 285 | 0.7863 |
0.8371 |
| 5ogk-assembly1.cif.gz_A | 1 | 292 | 1 | 283 | 0.7845 |
0.8382 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O34416-F1-model_v4 | 3 | 292 | 1 | 285 | 0.8524 |
0.8931 |
| AF-P14182-F1-model_v4 | 4 | 292 | 1 | 286 | 0.8495 |
0.8884 |
| AF-Q08794-F1-model_v4 | 1 | 292 | 4 | 297 | 0.8437 |
0.8896 |
| AF-P44170-F1-model_v4 | 7 | 292 | 1 | 286 | 0.8392 |
0.8731 |
| AF-Q4UNE6-F1-model_v4 | 1 | 292 | 6 | 282 | 0.8332 |
0.8993 |
| AF-O29740-F1-model_v4 | 2 | 292 | 1 | 285 | 0.8309 |
0.8699 |
| AF-P0ABT8-F1-model_v4 | 1 | 292 | 3 | 290 | 0.8307 |
0.8749 |
| AF-P0ABT9-F1-model_v4 | 1 | 292 | 3 | 290 | 0.8244 |
0.8694 |
| AF-P39649-F1-model_v4 | 1 | 292 | 1 | 283 | 0.8213 |
0.8756 |
| AF-P37511-F1-model_v4 | 1 | 292 | 1 | 293 | 0.8209 |
0.8597 |