Cluster: HRGMv2_3020_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3020
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3020_10 | HRGMv2_3020_10_5 | 5530 | 6951 | + | 9.A.40.2.2 |
| NULL(UNKNOWN) | HRGMv2_3020_10 | HRGMv2_3020_10_6 | 7155 | 8360 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3020_10 | HRGMv2_3020_10_7 | 8522 | 9868 | + | GH180 |
| pfam | HRGMv2_3020_10 | HRGMv2_3020_10_8 | 10072 | 11034 | + | Glyco_hydro_20 |
| pfam | HRGMv2_3020_10 | HRGMv2_3020_10_9 | 11174 | 12601 | + | ADP_ribosyl_GH |
| CAZyme | HRGMv2_3020_10 | HRGMv2_3020_10_10 | 13780 | 14511 | + | GH33 |
Gene ID: HRGMv2_3020_10_5
Type: TC
Location: 5530 - 6951 (+)
Type: TC
Location: 5530 - 6951 (+)
Gene ID: HRGMv2_3020_10_6
Type:
Location: 7155 - 8360 (+)
Type:
Location: 7155 - 8360 (+)
Gene ID: HRGMv2_3020_10_7
Type: CAZyme
Location: 8522 - 9868 (+)
Type: CAZyme
Location: 8522 - 9868 (+)
Gene ID: HRGMv2_3020_10_8
Type: pfam
Location: 10072 - 11034 (+)
Type: pfam
Location: 10072 - 11034 (+)
Gene ID: HRGMv2_3020_10_9
Type: pfam
Location: 11174 - 12601 (+)
Type: pfam
Location: 11174 - 12601 (+)
Gene ID: HRGMv2_3020_10_10
Type: CAZyme
Location: 13780 - 14511 (+)
Type: CAZyme
Location: 13780 - 14511 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-382
Genus
UMGS882
Species
UMGS882 sp003343885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.