PROTEIN: HRGMv2_3020_10_6
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Protein File & Metadata
Source:
HRGMv2_3020_10_6.pdb
Genome ID:
Protein ID:
HRGMv2_3020_10_6
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Protein Sequence
MIDYITPDST IAKTDDQSIT LAVKKAKETG INKVVIPKYN QRTGQNLWII ENCIRLPDDI 60 EIIIDGAHLR LADGVYSNMF CNENLGTDKG RTPQGKQKNI TIRGRGAATL DGGKYNGLSE 120 RNSEKDNLPH ISVNTTLFFA NVTGLTVENL NIINQRWWAI TNVFVSNAVF RNIRFKADLS 180 RIDADGIHHP NELPQNYGEI YVKNADGIDL RVGCHDVLIE NITGFTEDDT VALTALGTFE 240 SRLGYAVDGG DFDIHDVKIR HVASDPFCCS VVRLLNDNGF KLYNIDIDGV THLHLTDSAM 300 QTHAAVKIGD MAYAKKHSEL GDTHHISVRN VVSSAKYAVA LCKGLADSVI ENIFVAPGGI 360 YGVGASENDF AELERCRIEN ISAYSDSVEL MPADRLTVVR Q 401
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q0IMQ3-F1-model_v4 | 1 | 401 | 6 | 406 | 0.7193 |
0.7529 |
| AF-A0A1I9LN94-F1-model_v4 | 1 | 401 | 40 | 440 | 0.7039 |
0.7541 |
| AF-I1JBJ8-F1-model_v4 | 1 | 401 | 40 | 407 | 0.7021 |
0.7894 |
| AF-F4JQS2-F1-model_v4 | 1 | 401 | 35 | 412 | 0.6986 |
0.7708 |
| AF-A0A0R0JWQ5-F1-model_v4 | 1 | 401 | 38 | 425 | 0.6952 |
0.7619 |
| AF-A0A1D6IW31-F1-model_v4 | 1 | 401 | 40 | 441 | 0.6945 |
0.7541 |
| AF-A0A0P0WXI3-F1-model_v4 | 1 | 401 | 2 | 388 | 0.694 |
0.7478 |
| AF-Q9SWS3-F1-model_v4 | 1 | 401 | 42 | 430 | 0.6933 |
0.7611 |
| AF-Q9FXC1-F1-model_v4 | 1 | 401 | 44 | 431 | 0.6931 |
0.7554 |
| AF-I1LDL8-F1-model_v4 | 1 | 401 | 30 | 440 | 0.693 |
0.7558 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AWO01000.1 | GH0 | 1 | 383 | 1 | 358 | 0.8738 |
0.9317 |
| A0A1P8VW99 | GH0 | 1 | 401 | 21 | 375 | 0.7917 |
0.8725 |
| AF-A0A514YDD9-F1-model_v4 | GH28 | 3 | 401 | 1 | 356 | 0.7462 |
0.8092 |
| AF-A0A059Q071-F1-model_v4 | GH28 | 1 | 401 | 13 | 383 | 0.7302 |
0.7839 |
| A0A9R1VPG5 | GH28 | 1 | 401 | 22 | 393 | 0.7282 |
0.7889 |
| AF-Q2HUB1-F1-model_v4 | GH28 | 1 | 401 | 12 | 392 | 0.7281 |
0.771 |
| AF-I3SLB3-F1-model_v4 | GH28 | 1 | 401 | 23 | 382 | 0.7216 |
0.8083 |
| AF-A0A7I8LDQ0-F1-model_v4 | GH28 | 1 | 401 | 26 | 397 | 0.7201 |
0.7842 |
| AF-T1NXF1-F1-model_v4 | GH28 | 1 | 401 | 17 | 352 | 0.7198 |
0.8169 |
| AF-A0A804KUJ6-F1-model_v4 | GH28 | 1 | 401 | 14 | 385 | 0.7192 |
0.7828 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9R1VPG5 | GH28 | 1 | 401 | 22 | 393 | 0.7282 |
0.7889 |
| A0A0P0CDI8 | GH28 | 1 | 401 | 10 | 431 | 0.7223 |
0.7624 |
| A0A4Y3NC34 | GH28 | 1 | 385 | 61 | 382 | 0.7184 |
0.8784 |
| A0A2C8F7E4 | GH28 | 1 | 401 | 23 | 418 | 0.7174 |
0.7579 |
| A0A8A3PK25 | GH28 | 1 | 401 | 37 | 403 | 0.7155 |
0.8039 |
| A0A4Y1RW00 | GH28 | 1 | 401 | 24 | 410 | 0.7146 |
0.761 |
| A0A8H8JPF7 | GH28 | 1 | 401 | 22 | 409 | 0.7113 |
0.7634 |
| WCJ40567.1 | GH28 | 1 | 401 | 25 | 401 | 0.7109 |
0.7689 |
| A0A804L851 | GH28 | 1 | 401 | 21 | 406 | 0.7097 |
0.7621 |
| WFB34987.1 | GH28 | 1 | 401 | 2 | 437 | 0.7095 |
0.7552 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4c2l-assembly1.cif.gz_A | 3 | 401 | 1 | 362 | 0.7452 |
0.8078 |
| 6kvh-assembly1.cif.gz_A | 3 | 401 | 1 | 333 | 0.7307 |
0.8155 |
| 7e56-assembly1.cif.gz_A | 3 | 401 | 1 | 333 | 0.7296 |
0.8144 |
| 1nhc-assembly4.cif.gz_D | 3 | 401 | 1 | 333 | 0.725 |
0.8099 |
| 7b7a-assembly1.cif.gz_A | 2 | 401 | 1 | 376 | 0.7226 |
0.7734 |
| 4mr0-assembly2.cif.gz_B | 3 | 401 | 1 | 400 | 0.7095 |
0.7622 |
| 4mr0-assembly1.cif.gz_A | 3 | 401 | 1 | 402 | 0.7035 |
0.7636 |
| 2uvf-assembly1.cif.gz_A | 1 | 401 | 118 | 565 | 0.6422 |
0.7621 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2UBD8-F1-model_v4 | 1 | 401 | 33 | 396 | 0.7193 |
0.8086 |
| AF-A2QK83-F1-model_v4 | 1 | 401 | 33 | 396 | 0.7193 |
0.8081 |
| AF-Q9UUZ2-F1-model_v4 | 1 | 401 | 33 | 396 | 0.719 |
0.8078 |
| AF-B8NJB0-F1-model_v4 | 1 | 401 | 27 | 432 | 0.7167 |
0.7602 |
| AF-A2QBB4-F1-model_v4 | 1 | 401 | 28 | 433 | 0.7126 |
0.7571 |
| AF-I1BYM7-F1-model_v4 | 1 | 401 | 28 | 379 | 0.7101 |
0.8038 |
| AF-Q9Y718-F1-model_v4 | 1 | 401 | 30 | 364 | 0.706 |
0.8177 |
| AF-A1D415-F1-model_v4 | 1 | 401 | 28 | 416 | 0.7044 |
0.7587 |
| AF-Q1HAY5-F1-model_v4 | 1 | 401 | 21 | 357 | 0.7041 |
0.8063 |
| AF-Q4WBE1-F1-model_v4 | 1 | 401 | 28 | 361 | 0.704 |
0.8147 |