Cluster: HRGMv2_3013_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3013
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3013_3 | HRGMv2_3013_3_40 | 42142 | 43341 | - | GT4 |
| CAZyme | HRGMv2_3013_3 | HRGMv2_3013_3_41 | 43355 | 44329 | - | GT2 |
| pfam | HRGMv2_3013_3 | HRGMv2_3013_3_42 | 44331 | 44744 | - | CTP_transf_like |
| pfam | HRGMv2_3013_3 | HRGMv2_3013_3_43 | 44747 | 45535 | - | CDP-OH_P_transf |
| CAZyme | HRGMv2_3013_3 | HRGMv2_3013_3_44 | 45598 | 46767 | - | GT4 |
| TC | HRGMv2_3013_3 | HRGMv2_3013_3_45 | 46772 | 47479 | - | 9.B.18.1.3 |
Gene ID: HRGMv2_3013_3_40
Type: CAZyme
Location: 42142 - 43341 (-)
Type: CAZyme
Location: 42142 - 43341 (-)
Gene ID: HRGMv2_3013_3_41
Type: CAZyme
Location: 43355 - 44329 (-)
Type: CAZyme
Location: 43355 - 44329 (-)
Gene ID: HRGMv2_3013_3_42
Type: pfam
Location: 44331 - 44744 (-)
Type: pfam
Location: 44331 - 44744 (-)
Gene ID: HRGMv2_3013_3_43
Type: pfam
Location: 44747 - 45535 (-)
Type: pfam
Location: 44747 - 45535 (-)
Gene ID: HRGMv2_3013_3_44
Type: CAZyme
Location: 45598 - 46767 (-)
Type: CAZyme
Location: 45598 - 46767 (-)
Gene ID: HRGMv2_3013_3_45
Type: TC
Location: 46772 - 47479 (-)
Type: TC
Location: 46772 - 47479 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Species
UMGS1279 sp900550315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.