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Cluster: HRGMv2_3013_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3013_1 HRGMv2_3013_1_154 171759 172967 + GH109
pfam HRGMv2_3013_1 HRGMv2_3013_1_155 173078 174145 + APH
sulfatase HRGMv2_3013_1 HRGMv2_3013_1_156 174237 174947 + S1_9
CAZyme HRGMv2_3013_1 HRGMv2_3013_1_157 174959 176032 + CE9
pfam HRGMv2_3013_1 HRGMv2_3013_1_158 176301 177251 + 2-oxoacid_dh
CAZyme HRGMv2_3013_1 HRGMv2_3013_1_159 177851 179257 + CE7
NULL(UNKNOWN) HRGMv2_3013_1 HRGMv2_3013_1_160 179480 181642 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3013_1 HRGMv2_3013_1_161 181639 182538 - 3.A.1.147.8
Gene ID: HRGMv2_3013_1_154
Type: CAZyme
Location: 171759 - 172967 (+)
Gene ID: HRGMv2_3013_1_155
Type: pfam
Location: 173078 - 174145 (+)
Gene ID: HRGMv2_3013_1_156
Type: sulfatase
Location: 174237 - 174947 (+)
Gene ID: HRGMv2_3013_1_157
Type: CAZyme
Location: 174959 - 176032 (+)
Gene ID: HRGMv2_3013_1_158
Type: pfam
Location: 176301 - 177251 (+)
Gene ID: HRGMv2_3013_1_159
Type: CAZyme
Location: 177851 - 179257 (+)
Gene ID: HRGMv2_3013_1_160
Type:
Location: 179480 - 181642 (-)
Gene ID: HRGMv2_3013_1_161
Type: TC
Location: 181639 - 182538 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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