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Cluster: HRGMv2_3013_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3013_7 HRGMv2_3013_7_37 39079 41325 + GH36
STP HRGMv2_3013_7 HRGMv2_3013_7_38 41315 42289 + HD
CAZyme HRGMv2_3013_7 HRGMv2_3013_7_39 42809 45877 + GH2
pfam HRGMv2_3013_7 HRGMv2_3013_7_40 45880 46056 + DUF6472
pfam HRGMv2_3013_7 HRGMv2_3013_7_41 46278 46781 + CarD_TRCF_RID | CarD_C
TC HRGMv2_3013_7 HRGMv2_3013_7_42 46979 47719 - 3.A.1.3.20
TC HRGMv2_3013_7 HRGMv2_3013_7_43 47719 48525 - 3.A.1.3.20
TC HRGMv2_3013_7 HRGMv2_3013_7_44 48629 49474 - 3.A.1.3.20
Gene ID: HRGMv2_3013_7_37
Type: CAZyme
Location: 39079 - 41325 (+)
Gene ID: HRGMv2_3013_7_38
Type: STP
Location: 41315 - 42289 (+)
Gene ID: HRGMv2_3013_7_39
Type: CAZyme
Location: 42809 - 45877 (+)
Gene ID: HRGMv2_3013_7_40
Type: pfam
Location: 45880 - 46056 (+)
Gene ID: HRGMv2_3013_7_41
Type: pfam
Location: 46278 - 46781 (+)
Gene ID: HRGMv2_3013_7_42
Type: TC
Location: 46979 - 47719 (-)
Gene ID: HRGMv2_3013_7_43
Type: TC
Location: 47719 - 48525 (-)
Gene ID: HRGMv2_3013_7_44
Type: TC
Location: 48629 - 49474 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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