Cluster: HRGMv2_3013_CGC12
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_3013
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3013_6 | HRGMv2_3013_6_90 | 85243 | 86070 | - | 3.A.1.132.3 |
| NULL(UNKNOWN) | HRGMv2_3013_6 | HRGMv2_3013_6_91 | 86078 | 87619 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3013_6 | HRGMv2_3013_6_92 | 87616 | 89049 | - | Wzy_C |
| CAZyme | HRGMv2_3013_6 | HRGMv2_3013_6_93 | 89064 | 90161 | - | GT4 |
| pfam | HRGMv2_3013_6 | HRGMv2_3013_6_94 | 90158 | 90547 | - | CTP_transf_like |
| pfam | HRGMv2_3013_6 | HRGMv2_3013_6_95 | 90544 | 91392 | - | LicD |
| CAZyme | HRGMv2_3013_6 | HRGMv2_3013_6_96 | 91410 | 92588 | - | GT4 |
| CAZyme | HRGMv2_3013_6 | HRGMv2_3013_6_97 | 92585 | 93796 | - | GT4 |
| TC | HRGMv2_3013_6 | HRGMv2_3013_6_98 | 94025 | 94954 | - | 2.A.69.4.5 |
| NULL(UNKNOWN) | HRGMv2_3013_6 | HRGMv2_3013_6_99 | 95050 | 95826 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3013_6 | HRGMv2_3013_6_100 | 96238 | 97407 | - | GT4 |
Gene ID: HRGMv2_3013_6_90
Type: TC
Location: 85243 - 86070 (-)
Type: TC
Location: 85243 - 86070 (-)
Gene ID: HRGMv2_3013_6_91
Type:
Location: 86078 - 87619 (-)
Type:
Location: 86078 - 87619 (-)
Gene ID: HRGMv2_3013_6_92
Type: pfam
Location: 87616 - 89049 (-)
Type: pfam
Location: 87616 - 89049 (-)
Gene ID: HRGMv2_3013_6_93
Type: CAZyme
Location: 89064 - 90161 (-)
Type: CAZyme
Location: 89064 - 90161 (-)
Gene ID: HRGMv2_3013_6_94
Type: pfam
Location: 90158 - 90547 (-)
Type: pfam
Location: 90158 - 90547 (-)
Gene ID: HRGMv2_3013_6_95
Type: pfam
Location: 90544 - 91392 (-)
Type: pfam
Location: 90544 - 91392 (-)
Gene ID: HRGMv2_3013_6_96
Type: CAZyme
Location: 91410 - 92588 (-)
Type: CAZyme
Location: 91410 - 92588 (-)
Gene ID: HRGMv2_3013_6_97
Type: CAZyme
Location: 92585 - 93796 (-)
Type: CAZyme
Location: 92585 - 93796 (-)
Gene ID: HRGMv2_3013_6_98
Type: TC
Location: 94025 - 94954 (-)
Type: TC
Location: 94025 - 94954 (-)
Gene ID: HRGMv2_3013_6_99
Type:
Location: 95050 - 95826 (-)
Type:
Location: 95050 - 95826 (-)
Gene ID: HRGMv2_3013_6_100
Type: CAZyme
Location: 96238 - 97407 (-)
Type: CAZyme
Location: 96238 - 97407 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Species
UMGS1279 sp900550315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.