Cluster: HRGMv2_3007_CGC6

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_3007_2	HRGMv2_3007_2_166	186755	187498	-	3.A.1.124.6
TC	HRGMv2_3007_2	HRGMv2_3007_2_167	187503	188237	-	3.A.1.124.2
TC	HRGMv2_3007_2	HRGMv2_3007_2_168	188239	188943	-	3.A.1.124.6
STP	HRGMv2_3007_2	HRGMv2_3007_2_169	189072	191030	-	Pyr_redox_2
pfam	HRGMv2_3007_2	HRGMv2_3007_2_170	191088	191585	-	SnoaL_4
TC	HRGMv2_3007_2	HRGMv2_3007_2_171	191683	193011	-	2.A.35.1.5
pfam	HRGMv2_3007_2	HRGMv2_3007_2_172	193077	194069	-	Asparaginase \| Asparaginase_C
CAZyme	HRGMv2_3007_2	HRGMv2_3007_2_173	194269	195048	+	GT51
TC	HRGMv2_3007_2	HRGMv2_3007_2_174	195230	196642	+	2.A.66.1.28

Gene ID: HRGMv2_3007_2_166
Type: TC
Location: 186755 - 187498 (-)

Gene ID: HRGMv2_3007_2_167
Type: TC
Location: 187503 - 188237 (-)

Gene ID: HRGMv2_3007_2_168
Type: TC
Location: 188239 - 188943 (-)

Gene ID: HRGMv2_3007_2_169
Type: STP
Location: 189072 - 191030 (-)

Gene ID: HRGMv2_3007_2_170
Type: pfam
Location: 191088 - 191585 (-)

Gene ID: HRGMv2_3007_2_171
Type: TC
Location: 191683 - 193011 (-)

Gene ID: HRGMv2_3007_2_172
Type: pfam
Location: 193077 - 194069 (-)

Gene ID: HRGMv2_3007_2_173
Type: CAZyme
Location: 194269 - 195048 (+)

Gene ID: HRGMv2_3007_2_174
Type: TC
Location: 195230 - 196642 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_3007_2_169	vegetarian > omnivore	1.60193	0.00141
HRGMv2_3007_2_170	vegan > omnivore	1.54279	0.04492
HRGMv2_3007_2_170	vegetarian > omnivore	1.72622	0.00141
HRGMv2_3007_2_171	vegetarian > vegan	1.13584	0.00029