Cluster: HRGMv2_3007_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3007
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3007_1 | HRGMv2_3007_1_148 | 139826 | 141205 | - | 3.A.5.1.1 |
| TF | HRGMv2_3007_1 | HRGMv2_3007_1_149 | 141208 | 141564 | - | HTH_11 |
| CAZyme | HRGMv2_3007_1 | HRGMv2_3007_1_150 | 141743 | 148819 | + | GH94 | GT84 |
Gene ID: HRGMv2_3007_1_148
Type: TC
Location: 139826 - 141205 (-)
Type: TC
Location: 139826 - 141205 (-)
Gene ID: HRGMv2_3007_1_149
Type: TF
Location: 141208 - 141564 (-)
Type: TF
Location: 141208 - 141564 (-)
Gene ID: HRGMv2_3007_1_150
Type: CAZyme
Location: 141743 - 148819 (+)
Type: CAZyme
Location: 141743 - 148819 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.