Cluster: HRGMv2_3007_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3007
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3007_9 | HRGMv2_3007_9_2 | 1519 | 2994 | + | 3.A.1.2.19 |
| TC | HRGMv2_3007_9 | HRGMv2_3007_9_3 | 3011 | 4039 | + | 3.A.1.2.15 |
| CAZyme | HRGMv2_3007_9 | HRGMv2_3007_9_4 | 4115 | 5167 | + | GH179 |
Gene ID: HRGMv2_3007_9_2
Type: TC
Location: 1519 - 2994 (+)
Type: TC
Location: 1519 - 2994 (+)
Gene ID: HRGMv2_3007_9_3
Type: TC
Location: 3011 - 4039 (+)
Type: TC
Location: 3011 - 4039 (+)
Gene ID: HRGMv2_3007_9_4
Type: CAZyme
Location: 4115 - 5167 (+)
Type: CAZyme
Location: 4115 - 5167 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.