Cluster: HRGMv2_3007_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3007
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3007_8 | HRGMv2_3007_8_44 | 47458 | 49053 | + | 2.A.21.2.4 |
| pfam | HRGMv2_3007_8 | HRGMv2_3007_8_45 | 49085 | 49921 | + | PS_pyruv_trans |
| CAZyme | HRGMv2_3007_8 | HRGMv2_3007_8_46 | 49935 | 50816 | + | GT2 |
| CAZyme | HRGMv2_3007_8 | HRGMv2_3007_8_47 | 50813 | 51751 | + | GT2 |
Gene ID: HRGMv2_3007_8_44
Type: TC
Location: 47458 - 49053 (+)
Type: TC
Location: 47458 - 49053 (+)
Gene ID: HRGMv2_3007_8_45
Type: pfam
Location: 49085 - 49921 (+)
Type: pfam
Location: 49085 - 49921 (+)
Gene ID: HRGMv2_3007_8_46
Type: CAZyme
Location: 49935 - 50816 (+)
Type: CAZyme
Location: 49935 - 50816 (+)
Gene ID: HRGMv2_3007_8_47
Type: CAZyme
Location: 50813 - 51751 (+)
Type: CAZyme
Location: 50813 - 51751 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.