Cluster: HRGMv2_3007_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3007
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3007_7 | HRGMv2_3007_7_48 | 55588 | 57987 | + | GT35 |
| STP | HRGMv2_3007_7 | HRGMv2_3007_7_49 | 57992 | 58888 | + | PfkB |
| TC | HRGMv2_3007_7 | HRGMv2_3007_7_50 | 59059 | 60471 | + | 2.A.22.5.2 |
Gene ID: HRGMv2_3007_7_48
Type: CAZyme
Location: 55588 - 57987 (+)
Type: CAZyme
Location: 55588 - 57987 (+)
Gene ID: HRGMv2_3007_7_49
Type: STP
Location: 57992 - 58888 (+)
Type: STP
Location: 57992 - 58888 (+)
Gene ID: HRGMv2_3007_7_50
Type: TC
Location: 59059 - 60471 (+)
Type: TC
Location: 59059 - 60471 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.