Cluster: HRGMv2_3007_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3007
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3007_7 | HRGMv2_3007_7_32 | 38953 | 40302 | + | 3.A.1.1.45 |
| TC | HRGMv2_3007_7 | HRGMv2_3007_7_33 | 40537 | 41694 | + | 3.A.1.1.45 |
| TC | HRGMv2_3007_7 | HRGMv2_3007_7_34 | 41729 | 42547 | + | 3.A.1.1.45 |
| CAZyme | HRGMv2_3007_7 | HRGMv2_3007_7_35 | 42628 | 44160 | + | GH77 |
Gene ID: HRGMv2_3007_7_32
Type: TC
Location: 38953 - 40302 (+)
Type: TC
Location: 38953 - 40302 (+)
Gene ID: HRGMv2_3007_7_33
Type: TC
Location: 40537 - 41694 (+)
Type: TC
Location: 40537 - 41694 (+)
Gene ID: HRGMv2_3007_7_34
Type: TC
Location: 41729 - 42547 (+)
Type: TC
Location: 41729 - 42547 (+)
Gene ID: HRGMv2_3007_7_35
Type: CAZyme
Location: 42628 - 44160 (+)
Type: CAZyme
Location: 42628 - 44160 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.